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2020-08-28gnu: notmuch: Update to 0.30-0.31rc1.Mark H Weaver
Note: This actually updates to 0.31~rc1, but here we instead use the version number 0.30-0.31rc1 so that Guix will consider it older than version 0.31. The rationale for updating to a release candidate is that earlier versions do not work with Emacs 27. * gnu/packages/mail.scm (notmuch): Update to 0.30-0.31rc1. [source]: In the 'uri' field, avoid using the 'version' variable, which doesn't match the upstream file name. Add a 'file-name' field to work around the fact that Guix does not allow tildes ("~"). [arguments]: Add 'disable-failing-tests' phase.
2020-08-28gnu: gpgme: Update to 1.14.0.Mark H Weaver
* gnu/packages/gnupg.scm (gpgme): Update to 1.14.0. [arguments]: Remove field, which included only a 'disable-failing-test' phase that is no longer needed.
2020-08-28gnu: git-lfs: Make usage text available.Prafulla Giri
* gnu/packages/version-control.scm (git-lfs)[arguments]: Add phase 'man-gen to make usage text available for embedding for the 'build phase. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-08-27gnu: radicale: Update to 3.0.4.Vinicius Monego
* gnu/packages/dav.scm (radicale): Update to 3.0.4. [source]: Use git-fetch. [arguments]: Run the test suite. [native-inputs]: Add python-pytest, python-pytest-cov, python-pytest-flake8, python-pytest-isort, python-pytest-runner, python-waitress. [propagated-inputs]: Remove python-requests. Add python-dateutil, python-defusedxml, python-passlib, python-vobject. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-08-27gnu: Add xandikos.Vinicius Monego
* gnu/packages/dav.scm (xandikos): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-08-27gnu: linux-libre: Update to 5.8.5.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.8-version): Update to 5.8.5. (linux-libre-5.8-pristine-source): Update hash.
2020-08-27gnu: linux-libre@5.7: Update to 5.7.19.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.19. (linux-libre-5.7-pristine-source): Update hash.
2020-08-27pack: fakechroot: Honor $LD_LIBRARY_PATH.Ludovic Courtès
Until now, when using the "fakechroot" engine, $LD_LIBRARY_PATH would always be ignored. However, it's useful in some cases to allow users to specify LD_LIBRARY_PATH, so honor it. * gnu/packages/aux-files/run-in-namespace.c (concat_paths): New function. (exec_with_loader): Concatenante $LD_LIBRARY_PATH to the relocated AUDIT_LIBRARY_PATH.
2020-08-27gnu: sssd: Pass '--localstatedir=/var' and '--sysconfdir=/etc'.Ludovic Courtès
This ensures notably that libnss_sss looks for the mmap cache files in the right place, /var/lib/sss/mc, rather than in the store. * gnu/packages/patches/sssd-system-directories.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/sssd.scm (sssd)[source]: Use it. [arguments]: Pass "--localstatedir" and "--sysconfdir".
2020-08-27gnu: Add python-safety.Tanguy Le Carrour
* gnu/packages/python-xyz.scm (python-safety): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-08-27gnu: Add python-dparse.Tanguy Le Carrour
* gnu/packages/python-xyz.scm (python-dparse): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2020-08-27gnu: bitcoin-unlimited: Update to 1.9.0.0.Guillaume Le Vaillant
* gnu/packages/finance.scm (bitcoin-unlimited): Update to 1.9.0.0.
2020-08-27gnu: Add libflame.Efraim Flashner
* gnu/packages/maths.scm (libflame): New variable.
2020-08-27gnu: vcflib: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Adjust custom 'install phase to add vcflib.pc.
2020-08-27gnu: vcflib: Use shared libraries.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib)[source]: Add patch. Add snippet to adjust files for new locations. [inputs]: Add fastahack, smithwaterman, tabixpp, xz. [native-inputs]: Add pkg-config. Remove the package-source of fastahack, fsom, smithwaterman, tabixpp. [arguments]: Remove make-flags. Add custom phase to add the output lib directory to the rpath. Adjust custom 'unpack-submodule-sources for the change in native-inputs. Adjust custom 'install phase to also install libraries and headers. * gnu/packages/patches/vcflib-use-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2020-08-27gnu: fastahack: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Adjust custom 'install phase to add fastahack.pc.
2020-08-27gnu: fastahack: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Add phase to build PIE objects. Add custom phase to build dynamic library. Adjust custom 'install phase to install shared library and headers.
2020-08-27gnu: smithwaterman: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Adjust custom 'install phase to add smithwaterman.pc file.
2020-08-27gnu: smithwaterman: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Add custom phase to build PIE objects. Add custom 'build-dynamic phase to build dynamic library. Adjust custom 'install phase to install shared library and headers.
2020-08-27gnu: tabixpp: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Adjust custom 'install phase to add tabixpp.pc file.
2020-08-27gnu: tabixpp: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Adjust custom 'build phase to build shared library. Adjust custom 'install phase to install libraries and header.
2020-08-27Revert "gnu: inetutils: Do not refer to canonical coreutils."Mathieu Othacehe
This reverts commit 61560d4bef05711db86320794437e1b261f4b5aa because it triggers too many rebuilds.
2020-08-27gnu: inetutils: Do not refer to canonical coreutils.Mathieu Othacehe
Make sure not to retain a reference to the canonical coreutils package. The Guix System closure size would otherwise be increased by including references to both canonical and non-canonical version of those packages. * gnu/packages/admin.scm (inetutils)[inputs]: Add "coreutils", [arguments]: and point to it with PATHDEF_CP variable.
2020-08-27gnu: isc-dhcp: Do not refer to canonical coreutils.Mathieu Othacehe
Make sure not to retain a reference to the canonical coreutils and sed packages. The Guix System closure size would otherwise be increased by including references to both canonical and non-canonical version of those packages. * gnu/packages/admin.scm (isc-dhcp)[inputs]: Add "coreutils" and "sed", [arguments]: and use them, instead of their canonical counterpart.
2020-08-27gnu: emacs-modus-vivendi-theme: Update to 0.12.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-modus-vivendi-theme): Update to 0.12.0.
2020-08-27gnu: emacs-modus-operandi-theme: Update to 0.12.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-modus-operandi-theme): Update to 0.12.0.
2020-08-27gnu: Add emacs-auth-source-xoauth2.Morgan Smith
* gnu/packages/emacs-xyz.scm (emacs-auth-source-xoauth2): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-08-27gnu: lrslib: Update to 7.1.Andreas Enge
* gnu/packages/maths.scm (lrslib): Update to 7.1.
2020-08-27gnu: Add komikku.Leo Prikler
* gnu/packages/gnome.scm (komikku): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: libhandy: Update to 0.90.0.Leo Prikler
* gnu/packages/gnome.scm (libhandy): Update to 0.90.0. [source]<url>: Use GNOME gitlab. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-cloudscraper.Leo Prikler
* gnu/packages/python-web.scm (python-cloudscraper): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-requests-toolbelt-0.9.1.Leo Prikler
* gnu/packages/python-web.scm (python-requests-toolbelt-0.9.1): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-dateparser.Leo Prikler
* gnu/packages/python-xyz.scm (python-dateparser): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-pyparsing-2.4.7.Leo Prikler
* gnu/packages/python-xyz.scm (python-pyparsing-2.4.7): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-pure-protobuf.Leo Prikler
* gnu/packages/protobuf.scm (python-pure-protobuf): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27linux-libre: Enable module compression for all versions.Mathieu Othacehe
This is a follow-up of 5fe12be0dd03d1a316343549f8c131d931f21a9a. It enables module compression for all supported Linux versions. * gnu/packages/aux-files/linux-libre/4.14-arm.conf: Enable GZIP module compression. * gnu/packages/aux-files/linux-libre/4.14-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.14-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.4-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.4-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.9-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.9-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-x86_64.conf: Ditto.
2020-08-27gnu: kodi: Update to 18.8.Timotej Lazar
* gnu/packages/kodi.scm (kodi): Update to 18.8. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: gnome-mines: Update to 3.36.0.Michael Rohleder
* gnu/packages/gnome.scm (gnome-mines): Update to 3.36.0. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: libdazzle: Update to 3.37.1.Michael Rohleder
* gnu/packages/gnome.scm (libdazzle): Update to 3.37.1. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-stock-supply.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-stock-supply): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-purchase-request.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-purchase-request): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-purchase.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-purchase): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-invoice-stock.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-invoice-stock): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-invoice.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-invoice): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-product.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-product): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-analytic-account.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-analytic-account): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: xorg-server: Update replacement to 1.20.9 [security-fixes].Mark H Weaver
Includes fixes for CVE-2020-1436, CVE-2020-14345, CVE-2020-14346, and CVE-2020-14361. * gnu/packages/xorg.scm (xorg-server/fixed): Update to 1.20.9. * gnu/packages/patches/xorg-server-CVE-2020-14347.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-26gnu: linux-libre@5.7: Update to 5.7.18.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.18. (linux-libre-5.7-pristine-source): Update hash. (deblob-scripts-5.7): Update to 5.7.18.
2020-08-26gnu: linux-libre@5.4: Update to 5.4.61.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.61. (linux-libre-5.4-pristine-source): Update hash. (deblob-scripts-5.4): Update to 5.4.61.
2020-08-26gnu: linux-libre@4.19: Update to 4.19.142.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.142. (linux-libre-4.19-pristine-source): Update hash. (deblob-scripts-4.19): Update to 4.19.142.