Age | Commit message (Collapse) | Author |
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* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.11.
* gnu/packages/wine.scm (wine-staging): Update to 4.11.
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* gnu/packages/python-xyz.scm (python-dask): Update to 1.2.2.
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* gnu/packages/python-crypto.scm (python-bcrypt): Update to 3.1.7.
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* gnu/packages/python-xyz.scm (python-twisted): Update to 19.2.1.
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* gnu/packages/python-xyz.scm (python-astunparse): Update to 1.6.2.
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* gnu/packages/python-xyz.scm (python-robotframework): Update to 3.1.2.
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* gnu/packages/pdf.scm (pdfpc): Update to 4.3.4.
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* gnu/packages/xfce.scm (exo): Update to 0.12.6.
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* gnu/packages/video.scm (youtube-dl): Update to 2019.06.21.
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* gnu/packages/xdisorg.scm (scrot)[source]: Add FILE-NAME.
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* gnu/packages/databases.scm (python-lmdb): Update to 0.95.
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* gnu/packages/admin.scm (cbatticon): Update to 1.6.9.
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* gnu/packages/gnupg.scm (gpgme): Update to 1.13.1.
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* gnu/packages/maths.scm (gnuplot): Update to 5.2.7.
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* gnu/packages/sync.scm (rclone): Update to 1.48.0.
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* gnu/packages/algebra.scm (ratpoints): Move package from here...
* gnu/packages/sagemath.scm (ratpoints): ... to here.
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* gnu/packages/java.scm(openjdk12): New variable.
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* gnu/packages/emacs-xyz.scm (emacs-fish-completion): Update to 1.1.
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* gnu/packages/sagemath.scm (zn-poly): Install the static and the dynamic
library with its symlinks, and end a phase with #t.
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* gnu/packages/bioinformatics.scm (khmer): Update to 3.0.0a3.
[source]: Remove patch; remove seqan in snippet.
[inputs]: Add seqan-1.
* gnu/packages/patches/khmer-use-libraries.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
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Includes fixes for CVE-2019-11707 and CVE-2019-11708.
* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.7.2-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
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* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: New field.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.12.
(%linux-libre-hash): Update hash.
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* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.53.
(%linux-libre-4.19-hash): Update hash.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.128.
(%linux-libre-4.14-hash): Update hash.
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* gnu/packages/algebra.scm (ratpoints): Add "CCFLAGS=-fPIC" to make flags.
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* gnu/packages/algebra.scm (symmetrica): Add -fPIC compiler flag.
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* gnu/packages/algebra.scm (iml): Add configure flag --enable-shared.
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* gnu/packages/sagemath.scm (lcalc): New variable.
* gnu/packages/patches/lcalc-default-parameters-1.patch,
gnu/packages/patches/lcalc-default-parameters-2.patch,
gnu/packages/patches/lcalc-lcommon-h.patch,
gnu/packages/patches/lcalc-using-namespace-std.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register patches.
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* gnu/packages/patches/lrcalc-includes.patch: New file.
* gnu/packages/algebra.scm (lrcalc): Use patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
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* gnu/packages/mpi.scm (python-mpi4py): Update to 3.0.2.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Set
#:parallel-build? #f. Adjust 'build' phase to account for it.
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* gnu/packages/samba.scm (samba): Update to 4.10.5.
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* gnu/packages/chromium.scm (%chromium-version): Set to 75.0.3770.100.
(%chromium-origin): Update hash.
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* gnu/packages/video.scm (openh264): Update to 2.0.0.
[source](uri): Adjust file name.
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* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Install icons.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/sphinx.scm (python-sphinx,
python-sphinxcontrib-websupport)[home-page]: Use HTTPS.
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* gnu/packages/python-xyz.scm (python-unidecode): Update to 1.1.0.
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* gnu/packages/patches/dbus-CVE-2019-12749.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/glib.scm (dbus)[replacement]: New field.
(dbus/fixed): New variable.
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* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.7.
[inputs]: Add coreutils and sed.
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* gnu/packages/algebra.scm (iml): New variable.
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* gnu/packages/maths.scm (ppl): New variable.
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* gnu/services/mail.scm (%opensmtpd-pam-services): New variable.
(opensmtpd-service-type)[extensions]: Add it, extending
PAM-ROOT-SERVICE-TYPE.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
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* gnu/packages/bioinformatics.scm (ngs-sdk): Update to 2.9.6.
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* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.9.6.
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* gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.9.6.
[arguments]: Pass HAVE_HDF5 make flag; add build phase "patch-krypto-flags".
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* gnu/packages/guile.scm (guile-2.2.5): New variable.
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* gnu/packages/python-xyz.scm (python-jupyter-console): Update to 6.0.0.
[arguments]: Enable tests.
[propagated-inputs]: Replace python-prompt-toolkit-1 with
python-prompt-toolkit.
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* gnu/packages/python-xyz.scm (python2-jupyter-console): Implement without
package-with-python2.
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This reverts commit 059e4c9a15b52f7e4b262e3317eac238bf53103d.
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