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2022-12-04gnu: Remove rust-rust-crypto-0.2.Efraim Flashner
* gnu/packages/crates-io.scm (rust-rust-crypto-0.2): Delete variable.
2022-12-04gnu: Remove rust-ethbloom-0.5.Efraim Flashner
* gnu/packages/crates-io.scm (rust-ethbloom-0.5): Delete variable.
2022-12-04gnu: Remove rust-ethereum-types-0.9.Efraim Flashner
* gnu/packages/crates-io.scm (rust-ethereum-types-0.9): Delete variable.
2022-12-04gnu: Remove rust-generational-arena-0.2.Efraim Flashner
* gnu/packages/crates-io.scm (rust-generational-arena-0.2): Delete variable.
2022-12-04gnu: Remove rust-gimli-0.23.Efraim Flashner
* gnu/packages/crates-io.scm (rust-gimli-0.23): Delete variable.
2022-12-04gnu: Remove rust-goblin-0.0.Efraim Flashner
* gnu/packages/crates-io.scm (rust-goblin-0.0): Delete variable.
2022-12-04gnu: Remove rust-crossterm-winapi-0.6.Efraim Flashner
* gnu/packages/crates-io.scm (rust-crossterm-winapi-0.6): Delete variable.
2022-12-04gnu: Remove rust-crossterm-winapi-0.4.Efraim Flashner
* gnu/packages/crates-io.scm (rust-crossterm-winapi-0.4): Delete variable.
2022-12-04gnu: Remove rust-gfx-gl-0.6.Efraim Flashner
* gnu/packages/crates-graphics.scm (rust-gfx-gl-0.6): Delete variable.
2022-12-04gnu: Remove rust-glib-0.8.Efraim Flashner
* gnu/packages/crates-gtk.scm (rust-glib-0.8): Delete variable.
2022-12-04gnu: Remove rust-block-buffer-0.2.Efraim Flashner
* gnu/packages/crates-io.scm (rust-block-buffer-0.2): Delete variable.
2022-12-04gnu: Remove rust-chalk-derive-0.68.Efraim Flashner
* gnu/packages/crates-io.scm (rust-chalk-derive-0.68): Delete variable.
2022-12-04gnu: Remove rust-chalk-ir-0.68.Efraim Flashner
* gnu/packages/crates-io.scm (rust-chalk-ir-0.68): Delete variable.
2022-12-04gnu: jami: Apply a patch to fix a crash when using SIP.Maxim Cournoyer
* gnu/packages/patches/jami-sipaccount-segfault.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/jami.scm (%jami-sources): Apply it.
2022-12-04gnu: Do not use 'local-file' in Raspberry Pi OS examples.Maxim Cournoyer
As this breaks the 'tests/guix-system.sh' test. * gnu/system/examples/raspberry-pi-64-nfs-root.tmpl (%my-public-key): Delete variable. (raspberry-pi-64-nfs-root) [services]: Remove key from openssh-configuration. * gnu/system/examples/raspberry-pi-64.tmpl: Likewise. Reported-by: Vagrant Cascadian <vagrant@debian.org>
2022-12-04gnu: python-protobuf@3.6: Fix inputs and arguments.Ludovic Courtès
Fixes a regression introduced in 9b016e29912b11f52e67e59b211fa016d88fea4a, whereby the 'inputs' field would be invalid, plus "--cpp_implementation" wouldn't work. * gnu/packages/protobuf.scm (python-protobuf-3.6)[arguments]: New field. [inputs]: No longer refer to the inputs of PYTHON-PROTOBUF.
2022-12-03gnu: ungoogled-chromium: Update to 108.0.5359.94-1.Marius Bakke
* gnu/packages/chromium.scm (%chromium-version): Set to 108.0.5359.94. (%ungoogled-origin, ungoogled-chromium): Update hashes.
2022-12-03gnu: Add ts4900-utils.Maxim Cournoyer
* gnu/packages/embedded.scm (ts4900-utils): New variable.
2022-12-02services: configuration: Rename location accessor to "source-location".Maxim Cournoyer
Fixes <https://issues.guix.gnu.org/59423>. * gnu/services/configuration.scm (define-configuration-helper): Rename the accessor of the %location field from "NAME-location" to "NAME-source-location". Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Reported-by: Pierre Langlois <pierre.langlois@gmx.com>
2022-12-02gnu: loko-scheme: Update to 0.12.0.Zhu Zihao
* gnu/packages/loko.scm (loko-scheme): Update to 0.12.0. [arguments]<#:make-flags>: No need to specify GDB scripts directory. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02gnu: loko-scheme: Use G-expressions.Zhu Zihao
* gnu/packages/loko.scm (loko-scheme)[arguments]: Use G-expressions. <#:phases>: In 'akku-fixes', replace "(assoc-ref inputs name)" with "this-package-native-input". [native-inputs]: Use label-less style. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02gnu: python-protobuf: Use C++ implementation.Ontje Lünsdorf
* gnu/packages/protobuf.scm (python-protobuf): Use C++ implementation. [inputs]: Add protobuf. [arguments]: Add --cpp_implementation configure flags. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02gnu: Add rust-k9.Marius Bakke
* gnu/packages/crates-io.scm (rust-k9-0.11): New variable.
2022-12-02gnu: rust-digest: Update to 0.10.6.Marius Bakke
* gnu/packages/crates-io.scm (rust-digest-0.10): Update to 0.10.6.
2022-12-02gnu: QtWebEngine: Use more system libraries.Marius Bakke
* gnu/packages/qt.scm (qtwebengine)[source](snippet): Remove more files. [arguments]: Pass QT_FEATURES_system_foo for all supported libraries. [inputs]: Replace "harfbuzz" with HARFBUZZ-5.
2022-12-02gnu: python-biom-format: Update to 2.1.12.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-biom-format): Update to 2.1.12. [arguments]: Remove "relax" phase; update "disable-broken-tests" phase. [propagated-inputs]: Add python-scikit-bio.
2022-12-02gnu: Add python-scikit-bio.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-scikit-bio): New variable.
2022-12-02gnu: Add python-hdmedians.Ricardo Wurmus
* gnu/packages/statistics.scm (python-hdmedians): New variable.
2022-12-02gnu: python-pairtools: Update to 1.0.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pairtools): Update to 1.0.2. [source]: Update Github URL. [arguments]: Update patch in "fix-references" phase. [native-inputs]: Remove python-nose. [inputs]: Remove. [propagated-inputs]: Add python-bioframe, python-pandas, python-pysam, python-pyyaml, and python-scipy. [home-page]: Update.
2022-12-02gnu: python-pairtools: Run tests conditionally.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pairtools)[arguments]: Run tests conditionally.
2022-12-02gnu: python-pybedtools: Use pyproject-build-system.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pybedtools)[build-system]: Use pyproject-build-system. [arguments]: Import (guix build pyproject-build-system).
2022-12-02gnu: python-htsget: Update to 0.2.6.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-htsget): Update to 0.2.6. [build-system]: Use pyproject-build-system.
2022-12-02gnu: python-cellbender: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-cellbender): Update to 0.2.2. [build-system]: Use pyproject-build-system.
2022-11-27gnu: Add bgpq3.Felix Lechner
* gnu/packages/networking.scm (bgpq3): New variable. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-12-02gnu: rust-zerocopy: Add 0.6.1.Marius Bakke
* gnu/packages/crates-io.scm (rust-zerocopy-0.6): New variable. (rust-zerocopy-0.3): Inherit from it.
2022-12-02gnu: rust-zerocopy-derive: Add 0.3.2.Marius Bakke
* gnu/packages/crates-io.scm (rust-zerocopy-derive-0.3): New variable. (rust-zerocopy-derive-0.2): Inherit from it.
2022-12-02gnu: Add rust-sha1-smol.Marius Bakke
* gnu/packages/crates-io.scm (rust-sha1-smol-1): New variable.
2022-12-02gnu: rust-md-5: Add 0.10.5.Marius Bakke
* gnu/packages/crates-io.scm (rust-md-5-0.10): New variable. (rust-md-5-0.9): Inherit from it.
2022-12-02gnu: rust-md5-asm: Update to 0.5.0.Marius Bakke
* gnu/packages/crates-io.scm (rust-md5-asm-0.5): New variable. (rust-md5-asm-0.4): Inherit from it.
2022-12-02gnu: Add rust-atomic.Marius Bakke
* gnu/packages/crates-io.scm (rust-atomic-0.5): New variable.
2022-12-02gnu: rust-memoffset: Add 0.7.1.Marius Bakke
* gnu/packages/crates-io.scm (rust-memoffset-0.7): New variable. (rust-memoffset-0.6): Inherit from it.
2022-12-02gnu: rust-gl: Add 0.14.Marius Bakke
* gnu/packages/crates-graphics.scm (rust-gl-0.14): New variable. (rust-gl-0.11): Inherit.
2022-12-02gnu: ungoogled-chromium: Use git tag in ungoogled origin.Marius Bakke
* gnu/packages/chromium.scm (%ungoogled-origin)[uri]: Use %UNGOOGLED-REVISION instead of commit identifier.
2022-12-02gnu: kicad: Remove obsolete phases.Marius Bakke
* gnu/packages/engineering.scm (kicad)[arguments]: Remove two phases.
2022-12-02gnu: golly: Update to 4.2.Marius Bakke
* gnu/packages/games.scm (golly): Update to 4.2. [arguments]: Remove configure phase. [inputs]: Remove PYTHON-2 and WXWIDGETS-GTK2. Add PYTHON, SDL2, and WXWIDGETS. Remove labels while at it.
2022-12-02gnu: python-wxpython: Update to 4.2.0.Marius Bakke
* gnu/packages/wxwidgets.scm (python-wxpython): Update to 4.2.0. [propagated-inputs]: Add PYTHON-ATTRDICT.
2022-12-02gnu: wxWidgets: Update to 3.2.1.Marius Bakke
* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.2.1. [source](modules, snippet): New fields. [inputs]: Remove SDL. Add CATCH-FRAMEWORK, EXPAT, GSTREAMER, GST-PLUGINS-BASE, LIBNOTIFY, LIBPNG, LIBSECRET, PCRE, SDL2, WEBKITGTK-WITH-LIBSOUP2, and ZLIB [arguments]: Add "--enable-mediactrl" and "--enable-gui" to #:configure-flags. Remove aarch64 workaround. Install catch header in refer-to-inputs phase. Add phase to adjust WebKitGTK version. (wxwidgets-3.1, wxwidgets-gtk2-3.1): Remove variables. (wxwidgets-3.0, (wxwidgets-gtk2-3.0): New variables. (wxsvg)[inputs]: Change from WXWIDGETS-3.1 to WXWIDGETS. * gnu/packages/audio.scm (audacity)[inputs]: Likewise. * gnu/packages/cdrom.scm (dvdstyler)[inputs]: Likewise. * gnu/packages/astronomy.scm (imppg)[inputs]: Change from WXWIDGETS to WXWIDGETS-3.0. * gnu/packages/ftp.scm (filezilla)[inputs]: Likewise. * gnu/packages/games.scm (megaglest)[inputs]: Likewise. * gnu/packages/geo.scm (opencpn)[inputs]: Likewise. * gnu/packages/music.scm (sooperlooper)[inputs]: Likewise. * gnu/packages/engineering.scm (kicad)[arguments]: Enable EGL support.
2022-12-02gnu: wxWidgets: Remove input labels.Marius Bakke
* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Remove labels. [arguments]: Use SEARCH-INPUT-FILE. (wxwidgets-gtk2)[inputs]: Use MODIFY-INPUTS.
2022-12-02gnu: jucipp: Update to 1.7.2.Marius Bakke
* gnu/packages/text-editors.scm (jucipp): Update to 1.7.2. [arguments]: Skip one more test.
2022-12-02gnu: universal-ctags: Update to 5.9.20221127.0.Marius Bakke
* gnu/packages/code.scm (universal-ctags): Update to 5.9.20221127.0.
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