Age | Commit message (Collapse) | Author |
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* gnu/packages/admin.scm (shepherd-0.10): New variable.
(guile2.2-shepherd): Inherit from SHEPHERD-0.10.
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* gnu/packages/python-xyz.scm (python-sentry-sdk)[arguments]: Update 'check'
phase.
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* gnu/packages/gl.scm (guile-opengl): Update to 0.2.0. Remove obsolete build
system hack.
(guile3.0-opengl): Remove obsolete build system hack.
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* gnu/packages/diffoscope.scm (diffoscope): Update to 242.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/services/guix.scm (nar-herder-configuration-extra-environment-variables):
New procedure.
(nar-herder-shepherd-services): Pass the environment variables to the
shepherd.
* doc/guix.texi (Guix Services): Document it.
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* gnu/packages/cpp.scm (ftxui)[native-inputs]: Add benchmark.
[arguments]: Remove #:phases.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/game-development.scm (raylib)[inputs]: Use glfw and pluseaudio.
[arguments]: Set flags for glfw and pulseaudio.
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* gnu/packages/game-development.scm (raylib): Update to 4.5.0.
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* gnu/packages/python-web.scm (python-rapidjson)[build-system]: Use
pyproject-build-system.
[arguments]: Do not use custom 'build and 'check phases.
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* gnu/packages/python-xyz.scm (python-markdown-it-py)[arguments]: Remove
custom 'build and 'install phases.
[build-system]: Use pyproject-build-system.
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* gnu/packages/sphinx.scm (python-sphinx-panels)[propagated-inputs]: Replace
python-docutils with python-docutils-0.15.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase.
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Fixes <https://issues.guix.gnu.org/63421>.
* gnu/packages/haskell-check.scm (ghc-tasty)[inputs]: Conditionally
add ghc-unbounded-delays.
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* gnu/packages/python-xyz.scm (python-orjson)[arguments]: Remove invalid
characters from version string.
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* gnu/packages/python-xyz.scm (python-orjson)[arguments]: Include modules from
pyproject-build-system; use their 'build and 'install phases instead of
duplicating their contents.
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* gnu/packages/python-xyz.scm (python-canonicaljson)[arguments]: Remove custom
'build, 'check, and 'install phases.
[build-system]: Use pyproject-build-system.
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* gnu/packages/python-xyz.scm (python-pyproject-metadata)[arguments]: Remove.
[build-system]: Use pyproject-build-system.
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* gnu/packages/python-xyz.scm (python-seaborn)[arguments]: Remove.
[build-system]: Use pyproject-build-system.
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* gnu/packages/python-xyz.scm (shrinkwrap)[arguments]: Remove.
[build-system]: Use pyproject-build-system.
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* gnu/packages/bioinformatics.scm (jamm)[arguments]: Use G-expression.
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* gnu/packages/bioinformatics.scm (arriba)[arguments]:
Use SEARCH-INPUT-DIRECTORY and SEARCH-INPUT-FILE; use G-expression; drop
trailing #T from build phases.
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* gnu/packages/bioinformatics.scm (multichoos): Fix indentation.
[arguments]: Use G-expression.
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* gnu/packages/bioinformatics.scm (samblaster): Update to 0.1.26.
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* gnu/packages/bioinformatics.scm (samblaster): Fix indentation.
[arguments]: Use G-expression; drop trailing #T from 'install phase.
[description]: Use double spacing between all sentences.
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* gnu/packages/bioinformatics.scm (methyldackel): Update to 0.6.1.
[arguments]: Set LIBBIGWIG variable instead of patching Makefile.
[inputs]: Replace htslib-1.9 with htslib.
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* gnu/packages/bioinformatics.scm (methyldackel)[arguments]: Use list, drop
argument list.
[native-inputs]: Drop package label.
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* gnu/packages/bioinformatics.scm (phast)[arguments]: Use G-expression and
drop trailing #T from build phases.
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* gnu/packages/bioinformatics.scm (ribotaper)[arguments]: Use G-expression and
drop trailing #T from build phase.
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* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use G-expression for
clarity; drop trailing #T from build phases; modify 'configure phase to
dynamically link with libxml2.
[inputs]: Drop package labels; add libxml2.
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The most important change here is the addition of the 'install-libs phase.
All other changes are just the result of switching to G-expressions.
* gnu/packages/bioinformatics.scm (ncbi-vdb)[arguments]: Add 'install-libs
phase; use G-expression; drop trailing #T from build phases.
[inputs]: Drop package labels.
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* gnu/packages/bioinformatics.scm (python-mgatk): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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Fixes <https://issues.guix.gnu.org/20255>.
* gnu/system/shadow.scm (default-skeletons)[bash_profile, zprofile]:
Merge search-paths from multiple profiles via "guix package".
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* gnu/packages/fsf.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 20230511.
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The variant of the fastapi package must match that of
python-pytorch-lightning.
* gnu/packages/machine-learning.scm (python-lightning-cloud)
[propagated-inputs]: Replace python-fastapi with
python-fastapi-for-pytorch-lightning.
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* gnu/packages/python-xyz.scm (python-optparse-pretty): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioconductor.scm (r-dropletutils): New variable.
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* gnu/packages/cran.scm (r-ggpattern): New variable.
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* gnu/packages/cran.scm (r-gridpattern): New variable.
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Required packages can be seen with:
$ rg RequirePackage $(guix build texlive-datetime2)
* gnu/packages/tex.scm (texlive-datetime2)[propagated-inputs]: Add
TEXLIVE-ETOOLBOX, TEXLIVE-LATEX-XKEYVAL, and TEXLIVE-TRACKLANG.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-framemove): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/tex.scm (texlive-ddphonism)[propagated-inputs]: Replace
deprecated texlive-latex-tools by texlive-tools.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/tex.scm (texlive-totpages)[propagated-inputs]: Replace
deprecated texlive-latex-graphics by texlive-graphics.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/tex.scm (texlive-totcount)[propagated-inputs]: Replace
deprecated texlive-latex-graphics by texlive-graphics.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/tex.scm (texlive-ncctools)[propagated-inputs]: Replace
deprecated texlive-latex-graphics by texlive-graphics.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/tex.scm (texlive-soulutf8)[propagated-inputs]: Replace
deprecated texlive-generic-etexcmds by texlive-etexcmds and deprecated
texlive-generic-infwarerr by texlive-infwarerr.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/tex.scm (texlive-xetex)[propagated-inputs]: Replace deprecated
texlive-generic-atbegshi by texlive-atbegshi and deprecated
texlive-latex-atveryend by texlive-atveryend.
Signed-off-by: Josselin Poiret <dev@jpoiret.xyz>
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* gnu/packages/python-xyz.scm (python-skranger)[arguments]: Install the
library that we've just built.
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* gnu/packages/python-xyz.scm (python-skranger): New variable.
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This reverts commit 0a8c46e89f095a9ec3632d43920ac3cce49f16d5.
An older version of python-pytest-enabler already exists in (gnu packages
check).
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* gnu/packages/web-browsers.scm (lagrange): Update to 1.15.9.
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