From 1b2b1c30e2adec2afa868badbada45d7d7cd755d Mon Sep 17 00:00:00 2001 From: Mădălin Ionel Patrașcu Date: Wed, 13 Apr 2022 00:30:47 +0200 Subject: gnu: Add r-acde. * gnu/packages/bioconductor.scm (r-acde): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 786e79b931..6559e69711 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11729,6 +11729,31 @@ array noise or normalization methods. It is also very fast and can be applied on whole-genome tiling array experiments quite easily with enough memory.") (license license:gpl2+))) +(define-public r-acde + (package + (name "r-acde") + (version "1.24.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "acde" version)) + (sha256 + (base32 + "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6")))) + (properties `((upstream-name . "acde"))) + (build-system r-build-system) + (propagated-inputs (list r-boot)) + (home-page "https://bioconductor.org/packages/acde") + (synopsis + "Identification of differentially expressed genes with artificial components") + (description + "This package provides a multivariate inferential analysis method for +detecting differentially expressed genes in gene expression data. It uses +artificial components, close to the data's principal components but with an +exact interpretation in terms of differential genetic expression, to identify +differentially expressed genes while controlling the @dfn{false discovery +rate} (FDR).") + (license license:gpl3))) + ;; This is a CRAN package, but it depends on Bioconductor packages, so we put ;; it here. (define-public r-activedriverwgs -- cgit 1.4.1