From 990bac0ea5daae426801df9b64e67d51a9316d8d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 11 Jul 2023 16:36:42 +0200 Subject: gnu: Add r-pfamanalyzer. * gnu/packages/bioconductor.scm (r-pfamanalyzer): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 20add7af89..840a9cdde8 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8313,6 +8313,29 @@ the results is also provided. All PCA methods make use of the same data structure (pcaRes) to provide a common interface to the PCA results.") (license license:gpl3+))) +(define-public r-pfamanalyzer + (package + (name "r-pfamanalyzer") + (version "1.0.1") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "pfamAnalyzeR" version)) + (sha256 + (base32 + "0zff887lc4bjrv683kqsw47vjwmf6886wybklsf2wd6hpy23mxfy")))) + (properties `((upstream-name . "pfamAnalyzeR"))) + (build-system r-build-system) + (propagated-inputs (list r-dplyr r-magrittr r-readr r-stringr r-tibble)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/pfamAnalyzeR") + (synopsis "Identification of domain isotypes in pfam data") + (description + "This R package enables the user to read pfam predictions into R. Most +human protein domains exist as multiple distinct variants termed domain +isotypes. This R package enables the identification and classification of such +domain isotypes from pfam data.") + (license license:expat))) + ;; This is a CRAN package, but it depends on a Bioconductor package: ;; r-aroma-light, r-dnacopy.. (define-public r-pscbs -- cgit 1.4.1