From 30c56e67f7bbad2501fc855b404bd30c5bf68524 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 09:59:45 +0100 Subject: gnu: r-crosstalk: Update to 1.1.0.1. * gnu/packages/cran.scm (r-crosstalk): Update to 1.1.0.1. [propagated-inputs]: Remove r-ggplot2 and r-shiny. --- gnu/packages/cran.scm | 10 ++++------ 1 file changed, 4 insertions(+), 6 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4c18275eaa..f0f6c9e8be 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1157,22 +1157,20 @@ in R and Shiny via the D3 visualization library.") (define-public r-crosstalk (package (name "r-crosstalk") - (version "1.0.0") + (version "1.1.0.1") (source (origin (method url-fetch) (uri (cran-uri "crosstalk" version)) (sha256 (base32 - "0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk")))) + "03ihj7cimkklrbad9zic78xsrfcisygmgy859hqnx0hiph80p9rn")))) (build-system r-build-system) (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-htmltools" ,r-htmltools) + `(("r-htmltools" ,r-htmltools) ("r-jsonlite" ,r-jsonlite) ("r-lazyeval" ,r-lazyeval) - ("r-r6" ,r-r6) - ("r-shiny" ,r-shiny))) + ("r-r6" ,r-r6))) (home-page "https://rstudio.github.io/crosstalk/") (synopsis "Inter-widget interactivity for HTML widgets") (description -- cgit 1.4.1 From 07764987407d2faf22686e932ae170b34e9554ba Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:00:07 +0100 Subject: gnu: r-glue: Update to 1.3.2. * gnu/packages/cran.scm (r-glue): Update to 1.3.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f0f6c9e8be..273f47c1b9 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1521,14 +1521,14 @@ colors are provided.") (define-public r-glue (package (name "r-glue") - (version "1.3.1") + (version "1.3.2") (source (origin (method url-fetch) (uri (cran-uri "glue" version)) (sha256 (base32 - "1a1ycg9r3gd91visp49q49rsrdgyf8kr9dxdy3hk99kikn4z5hag")))) + "0alklqcf68kmccssp4j7a7fv553pyqyy6mkkfslav83inppm4d3g")))) (build-system r-build-system) (home-page "https://github.com/tidyverse/glue") (synopsis "Interpreted string literals") -- cgit 1.4.1 From cabdfeab76e777497f9a1cc4fa6b7e6b58497c86 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:00:14 +0100 Subject: gnu: r-rcpp: Update to 1.0.4. * gnu/packages/cran.scm (r-rcpp): Update to 1.0.4. [native-inputs]: Remove r-knitr. --- gnu/packages/cran.scm | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 273f47c1b9..ef0d3b875f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1689,16 +1689,14 @@ you to rapidly iterate while developing a package.") (define-public r-rcpp (package (name "r-rcpp") - (version "1.0.3") + (version "1.0.4") (source (origin (method url-fetch) (uri (cran-uri "Rcpp" version)) (sha256 - (base32 "03h3zyjq948y0hrrs95lfk4zgx6wfrg64hjlrfrzf5na7bfh0d9b")))) + (base32 "1m80pdhzi2p82db5xkbwc2m3fzv6df59955yj03nlq40fj7zx4nr")))) (build-system r-build-system) - (native-inputs - `(("r-knitr" ,r-knitr))) ; for vignettes (home-page "http://www.rcpp.org") (synopsis "Seamless R and C++ integration") (description -- cgit 1.4.1 From 1c7a4952ff728177de40d0037e8b75d9e73c412e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:00:29 +0100 Subject: gnu: r-ffbase: Update to 0.12.8. * gnu/packages/cran.scm (r-ffbase): Update to 0.12.8. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ef0d3b875f..6406e167f4 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2010,14 +2010,14 @@ in main memory.") (define-public r-ffbase (package (name "r-ffbase") - (version "0.12.7") + (version "0.12.8") (source (origin (method url-fetch) (uri (cran-uri "ffbase" version)) (sha256 (base32 - "04kxx2f3f0743c5nvpb7x1x0pcd220dazpd5ag1pidxbz3xa85nw")))) + "0mjk7dkq1ginqqfvngzny747ggf9a8fd7kblq96n5ys1jrwjyqhq")))) (build-system r-build-system) (propagated-inputs `(("r-bit" ,r-bit) -- cgit 1.4.1 From b8168e894547af5650300457810848ae8f65a357 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:00:36 +0100 Subject: gnu: r-rmysql: Update to 0.10.20. * gnu/packages/cran.scm (r-rmysql): Update to 0.10.20. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 6406e167f4..350e439b41 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2796,14 +2796,14 @@ dimensioned arrays.") (define-public r-rmysql (package (name "r-rmysql") - (version "0.10.19") + (version "0.10.20") (source (origin (method url-fetch) (uri (cran-uri "RMySQL" version)) (sha256 (base32 - "0269pfq791qvax69lrwvvzgllyzm3cy3sdp9sakwxzvw5pxk2vhv")))) + "0lv9m6zpm8dgv7yixr6xhw379vbq45d7n7gkrmjrppdj8vcih77i")))) (properties `((upstream-name . "RMySQL"))) (build-system r-build-system) (inputs -- cgit 1.4.1 From 99de0bd1dc3e1d5d7e826a526ae1ce7d97441048 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:00:48 +0100 Subject: gnu: r-recipes: Update to 0.1.10. * gnu/packages/cran.scm (r-recipes): Update to 0.1.10. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 350e439b41..7893219a0c 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3098,14 +3098,14 @@ provides a one-row summary of model-level statistics.") (define-public r-recipes (package (name "r-recipes") - (version "0.1.9") + (version "0.1.10") (source (origin (method url-fetch) (uri (cran-uri "recipes" version)) (sha256 (base32 - "1fmnka583sqm6v5bhxbllb4cd5xfqbf268aij2xgxiwckv3c0ynm")))) + "11f96aanrzi2v6cn49fhvf9y4cmhra63wcy6nvpv6hcfaqqmwd2g")))) (build-system r-build-system) (propagated-inputs `(("r-dplyr" ,r-dplyr) @@ -3123,6 +3123,8 @@ provides a one-row summary of model-level statistics.") ("r-tidyselect" ,r-tidyselect) ("r-timedate" ,r-timedate) ("r-withr" ,r-withr))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/topepo/recipes") (synopsis "Preprocessing tools to create design matrices") (description -- cgit 1.4.1 From e6f4f314ba55b9236689d130e146e64224db8f9d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:01:04 +0100 Subject: gnu: r-officer: Update to 0.3.8. * gnu/packages/cran.scm (r-officer): Update to 0.3.8. [propagated-inputs]: Remove r-digest. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7893219a0c..ab47103c04 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -6198,22 +6198,23 @@ references and Rd files.") (define-public r-officer (package (name "r-officer") - (version "0.3.7") + (version "0.3.8") (source (origin (method url-fetch) (uri (cran-uri "officer" version)) (sha256 (base32 - "1zyrcf0xxm67bskynjac8dhil2as7rb0mmqaq30zp9lrgfwiycpz")))) + "0xhx5n6qksyh2s9hvwhnc8y0hn362asc5y94ld06snad786hz0rw")))) (build-system r-build-system) (propagated-inputs - `(("r-digest" ,r-digest) - ("r-magrittr" ,r-magrittr) + `(("r-magrittr" ,r-magrittr) ("r-r6" ,r-r6) ("r-uuid" ,r-uuid) ("r-xml2" ,r-xml2) ("r-zip" ,r-zip))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://davidgohel.github.io/officer") (synopsis "Manipulation of Word and PowerPoint documents") (description -- cgit 1.4.1 From 5cef0ef018ec113e24b32d85c4f5108e9584e6c1 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:01:29 +0100 Subject: gnu: r-pwr: Update to 1.3-0. * gnu/packages/cran.scm (r-pwr): Update to 1.3-0. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ab47103c04..cb8e95fa24 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8276,14 +8276,14 @@ comparisons of slopes.") (define-public r-pwr (package (name "r-pwr") - (version "1.2-2") + (version "1.3-0") (source (origin (method url-fetch) (uri (cran-uri "pwr" version)) (sha256 (base32 - "0r5g781lr677vp3zyhgmi7r68c87l8gd05l1s3ffnxgn5wf043sm")))) + "1kfzy73v3z6ipc3kdfkcjrp4b4p5k54nwk796gqi36srm93hgc2v")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr))) -- cgit 1.4.1 From bd1a2cb2c47adb37c2403a785b975a11563b4158 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:01:40 +0100 Subject: gnu: r-glmmtmb: Update to 1.0.1. * gnu/packages/cran.scm (r-glmmtmb): Update to 1.0.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index cb8e95fa24..449c2adafc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8449,14 +8449,14 @@ models.") (define-public r-glmmtmb (package (name "r-glmmtmb") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "glmmTMB" version)) (sha256 (base32 - "1md4yw4kbng953rz1n9g1v2xffk3cxx1qmp0kvbdayg1s82l1rgx")))) + "0sdx1q7wc7895xh8747r4p0wkij0xjgn5ij62ipi9423zd0sr0mm")))) (properties `((upstream-name . "glmmTMB"))) (build-system r-build-system) (propagated-inputs -- cgit 1.4.1 From 49b68b64f703aaec04c2a4e89ef65050d890547b Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:01:48 +0100 Subject: gnu: r-ggeffects: Update to 0.14.2. * gnu/packages/cran.scm (r-ggeffects): Update to 0.14.2. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 449c2adafc..6617208351 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8533,19 +8533,21 @@ effects models and Bayesian models.") (define-public r-ggeffects (package (name "r-ggeffects") - (version "0.14.1") + (version "0.14.2") (source (origin (method url-fetch) (uri (cran-uri "ggeffects" version)) (sha256 (base32 - "07pvs18vlybp96zz1wjr7cwiwi1cvjwkb9ahxzq0vd6adnd6ya59")))) + "1y3yfb07jrr6vkc8hk6rp52l70dj7042jvqgjzllslzy7hx2jhyw")))) (build-system r-build-system) (propagated-inputs `(("r-insight" ,r-insight) ("r-mass" ,r-mass) ("r-sjlabelled" ,r-sjlabelled))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/strengejacke/ggeffects") (synopsis "Create tidy data frames of marginal effects for ggplot") (description -- cgit 1.4.1 From ef1443928eb814a7ea9f96f97ba0295f44f276bf Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:02:05 +0100 Subject: gnu: r-waveslim: Update to 1.8.2. * gnu/packages/cran.scm (r-waveslim): Update to 1.8.2. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 6617208351..4eac5a02cf 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -9756,14 +9756,14 @@ Processing.") (define-public r-waveslim (package (name "r-waveslim") - (version "1.7.5.2") + (version "1.8.2") (source (origin (method url-fetch) (uri (cran-uri "waveslim" version)) (sha256 (base32 - "166ai4q3mlh3v338si952z7fbgph80h0l4ws6bna8ig5jx81rnmz")))) + "0ibivnhz0l06sss5rrrcvyiwg3qpbyk3qn4vx4pp90kj09x4yg0k")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) -- cgit 1.4.1 From dacebbf066a87634c5b771c55fbbb2deca951b81 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:02:13 +0100 Subject: gnu: r-nonnest2: Update to 0.5-3. * gnu/packages/cran.scm (r-nonnest2): Update to 0.5-3. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4eac5a02cf..3c6dc5f597 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12345,20 +12345,22 @@ latent growth curve models.") (define-public r-nonnest2 (package (name "r-nonnest2") - (version "0.5-2") + (version "0.5-3") (source (origin (method url-fetch) (uri (cran-uri "nonnest2" version)) (sha256 (base32 - "1bq44qqmm59j91m0sny4xnqmxqlga4cm48qdsw8xfs3x19xwmxk6")))) + "1mnv4pa583ir9s03h952hk40lwdywr3g88g76sk1zsa54rcmn82c")))) (build-system r-build-system) (propagated-inputs `(("r-compquadform" ,r-compquadform) ("r-lavaan" ,r-lavaan) ("r-mvtnorm" ,r-mvtnorm) ("r-sandwich" ,r-sandwich))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://cran.r-project.org/web/packages/nonnest2/") (synopsis "Tests of non-nested models") (description -- cgit 1.4.1 From 999204f7f79fde7ee53ba6f27e1179d00d02d8e5 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:02:29 +0100 Subject: gnu: r-units: Update to 0.6-6. * gnu/packages/cran.scm (r-units): Update to 0.6-6. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3c6dc5f597..c621da6fd6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13017,19 +13017,21 @@ utilities for sequence data management under the ACNUC system.") (define-public r-units (package (name "r-units") - (version "0.6-5") + (version "0.6-6") (source (origin (method url-fetch) (uri (cran-uri "units" version)) (sha256 (base32 - "02nls8m0r1r7kljs4x35naz3szq62hyqyd5vracf1xwi1kz5kdsh")))) + "11x6xz1fbml28xmrhgn4sii9vfyj3gyfc1dfxahdg9cszdmcgdnh")))) (build-system r-build-system) (inputs `(("udunits" ,udunits))) (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/r-quantities/units/") (synopsis "Measurement Units for R Vectors") (description -- cgit 1.4.1 From ac9bdd4c68ce25e618b03b52187a600501514db9 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:02:45 +0100 Subject: gnu: r-ggraph: Update to 2.0.2. * gnu/packages/cran.scm (r-ggraph): Update to 2.0.2. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index c621da6fd6..d9cfc6072b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -14284,14 +14284,14 @@ databases, including ENA, PDB or ChEMBL are also accessible.") (define-public r-ggraph (package (name "r-ggraph") - (version "2.0.1") + (version "2.0.2") (source (origin (method url-fetch) (uri (cran-uri "ggraph" version)) (sha256 (base32 - "0q2yqsb981a2arf9j530kqs61vw38ixyxbhb6yvv7skgbck02r6y")))) + "1ckq82hg52vr2wydkqv2wrppgjyvddd6bwqzrngqlm7j71xapjl0")))) (build-system r-build-system) (propagated-inputs `(("r-digest" ,r-digest) @@ -14308,6 +14308,8 @@ databases, including ENA, PDB or ChEMBL are also accessible.") ("r-scales" ,r-scales) ("r-tidygraph" ,r-tidygraph) ("r-viridis" ,r-viridis))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://cran.r-project.org/web/packages/ggraph/") (synopsis "Implementation of grammar of graphics for graphs and networks") (description -- cgit 1.4.1 From 69e260c54205eb660687779fb17b6a3fb2780956 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:03:02 +0100 Subject: gnu: r-uwot: Update to 0.1.8. * gnu/packages/cran.scm (r-uwot): Update to 0.1.8. [propagated-inputs]: Remove r-rcppparallel. --- gnu/packages/cran.scm | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d9cfc6072b..3ac71e26b3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -15379,14 +15379,14 @@ in R, including a translation of the original algorithm into R.") (define-public r-uwot (package (name "r-uwot") - (version "0.1.5") + (version "0.1.8") (source (origin (method url-fetch) (uri (cran-uri "uwot" version)) (sha256 (base32 - "0pz9wa89xq4d119q86lskrznf979m0r1db8iaprcz7kxbi6b8lrj")))) + "1jzh8r1h6f7pw7pb1fr32vn6ai9g10s56ahkq0vi77iznihy1rpd")))) (build-system r-build-system) (propagated-inputs `(("r-dqrng" ,r-dqrng) @@ -15395,7 +15395,6 @@ in R, including a translation of the original algorithm into R.") ("r-matrix" ,r-matrix) ("r-rcpp" ,r-rcpp) ("r-rcppannoy" ,r-rcppannoy) - ("r-rcppparallel" ,r-rcppparallel) ("r-rcppprogress" ,r-rcppprogress) ("r-rspectra" ,r-rspectra))) (home-page "https://github.com/jlmelville/uwot") -- cgit 1.4.1 From c7eb52e64c935e8c9c3f1dec67613b001a542a69 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:03:20 +0100 Subject: gnu: r-accept: Update to 0.7.1. * gnu/packages/cran.scm (r-accept): Update to 0.7.1. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3ac71e26b3..88237f1a06 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16696,14 +16696,14 @@ elicitation options based on Kass and Vaidyanathan (1992) (define-public r-accept (package (name "r-accept") - (version "0.7.0") + (version "0.7.1") (source (origin (method url-fetch) (uri (cran-uri "accept" version)) (sha256 (base32 - "1r4mhy9g4wjcjgdd0gwdarmr09292il3vdkmx0hz7vh9mffyr9kx")))) + "0pn8q0jsi0nb2mm2kv6sjczflflshhy55y7nqqnk70yx9f6wm83y")))) (properties `((upstream-name . "accept"))) (build-system r-build-system) (propagated-inputs -- cgit 1.4.1 From 40e5102449e7c5ea1b6c9a78fd8528e4862c1251 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:03:27 +0100 Subject: gnu: r-isocodes: Update to 2020.03.16. * gnu/packages/cran.scm (r-isocodes): Update to 2020.03.16. --- gnu/packages/cran.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 88237f1a06..34bc104960 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19390,14 +19390,14 @@ and Euclidean distance is particularly fast.") (define-public r-isocodes (package (name "r-isocodes") - (version "2019.12.22") + (version "2020.03.16") (source (origin (method url-fetch) (uri (cran-uri "ISOcodes" version)) (sha256 (base32 - "1k2f2258bwzs0b3nxma9kcw395qkljvk514a7047rx4dn0iwd874")))) + "1hz1sj57qkkkrgn8slsz2n4jv1fkyp40503j9rg30lxy4gmb83hn")))) (properties `((upstream-name . "ISOcodes"))) (build-system r-build-system) (home-page "https://cran.r-project.org/package=ISOcodes") -- cgit 1.4.1 From ecf34a91015280f4055f2c23665b6421a828bb7a Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 19 Mar 2020 10:03:43 +0100 Subject: gnu: r-quanteda: Update to 2.0.1. * gnu/packages/cran.scm (r-quanteda): Update to 2.0.1. [native-inputs]: Add r-knitr. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 34bc104960..2fc62edb4b 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19479,14 +19479,14 @@ Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish.") (define-public r-quanteda (package (name "r-quanteda") - (version "2.0.0") + (version "2.0.1") (source (origin (method url-fetch) (uri (cran-uri "quanteda" version)) (sha256 (base32 - "0snr610vahbdqkmma0zy5mg5qbb6n1b8sgsclqb2sccn1gg38vyy")))) + "0pym6vdzqbkyj87m3pla229092xvvx4j830x67qflxzzdmc9dzhz")))) (properties `((upstream-name . "quanteda"))) (build-system r-build-system) (propagated-inputs @@ -19509,6 +19509,8 @@ Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish.") ("r-stringi" ,r-stringi) ("r-xml2" ,r-xml2) ("r-yaml" ,r-yaml))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://quanteda.io") (synopsis "Quantitative analysis of textual data") (description -- cgit 1.4.1 From 7ea838447c3cc07c35d45ba8ae43e64ae8ff36c3 Mon Sep 17 00:00:00 2001 From: Tobias Geerinckx-Rice Date: Sat, 21 Mar 2020 00:07:28 +0100 Subject: gnu: r-maptools: Use HTTPS home page. * gnu/packages/cran.scm (r-maptools)[home-page]: Use HTTPS. --- gnu/packages/cran.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2fc62edb4b..2ef1b931a8 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -5516,7 +5516,7 @@ simple method for converting between file types.") `(("r-foreign" ,r-foreign) ("r-lattice" ,r-lattice) ("r-sp" ,r-sp))) - (home-page "http://r-forge.r-project.org/projects/maptools/") + (home-page "https://r-forge.r-project.org/projects/maptools/") (synopsis "Tools for reading and handling spatial objects") (description "This package provides a set of tools for manipulating and reading -- cgit 1.4.1 From 1163dacd4b4d9d274be5e8393072323435e9236a Mon Sep 17 00:00:00 2001 From: Naga Malleswari Date: Thu, 19 Mar 2020 13:29:05 +0530 Subject: gnu: Add r-crochet. * gnu/packages/cran.scm (r-crochet): New variable. Signed-off-by: Danny Milosavljevic --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2ef1b931a8..a001e135e6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -20802,3 +20802,24 @@ statistics and p-values of the correlation coefficients.") scales and utilities, including a spell check function for plot label fields and an overall emphasis on typography.") (license license:expat))) + +(define-public r-crochet + (package + (name "r-crochet") + (version "2.2.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "crochet" version)) + (sha256 + (base32 + "1cbv79nyycxk6f8ldcsnn2pvgxqlnrj0qs19nhafnq2clxy863k6")))) + (build-system r-build-system) + (home-page "https://github.com/agrueneberg/crochet") + (synopsis "Implementation Helper for Matrix-Like Types") + (description + "Functions to help implement the extraction / subsetting / indexing +function @code{[} and replacement function @code{[<-} of custom matrix-like +types (based on S3, S4, etc.), modeled as closely to the base matrix class +as possible (with tests to prove it).") + (license license:expat))) -- cgit 1.4.1 From ba2a1436d8fd8bedb596d792a65517facd2815cc Mon Sep 17 00:00:00 2001 From: Danny Milosavljevic Date: Thu, 19 Mar 2020 23:52:50 +0100 Subject: gnu: Add r-boa. * gnu/packages/cran.scm (r-boa): New variable. Signed-off-by: Danny Milosavljevic --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a001e135e6..e022651616 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -20823,3 +20823,24 @@ function @code{[} and replacement function @code{[<-} of custom matrix-like types (based on S3, S4, etc.), modeled as closely to the base matrix class as possible (with tests to prove it).") (license license:expat))) + +(define-public r-boa + (package + (name "r-boa") + (version "1.1.8-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "boa" version)) + (sha256 + (base32 + "04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp")))) + (properties `((upstream-name . "boa"))) + (build-system r-build-system) + (home-page "http://www.jstatsoft.org/v21/i11") + (synopsis "Library for @dfn{Bayesian Output Analysis Program} (BOA) for MCMC") + (description + "This package provides a menu-driven program and library of functions for +carrying out convergence diagnostics and statistical and graphical analysis of +@dfn{Markov chain Monte Carlo} (MCMC) sampling output.") + (license license:gpl2+))) -- cgit 1.4.1 From ae105119812bca8e9f2d74dcf11be95a293c0cc6 Mon Sep 17 00:00:00 2001 From: Wiktor Żelazny Date: Thu, 3 Oct 2019 15:46:37 +0200 Subject: gnu: Add r-httpcode. * gnu/packages/cran.scm (r-httpcode): New variable. Signed-off-by: Marius Bakke --- gnu/packages/cran.scm | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e022651616..1e55606ef9 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -20844,3 +20844,22 @@ as possible (with tests to prove it).") carrying out convergence diagnostics and statistical and graphical analysis of @dfn{Markov chain Monte Carlo} (MCMC) sampling output.") (license license:gpl2+))) + +(define-public r-httpcode + (package + (name "r-httpcode") + (version "0.2.0") + (source (origin + (method url-fetch) + (uri (cran-uri "httpcode" version)) + (sha256 + (base32 + "06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv")))) + (build-system r-build-system) + (home-page "https://github.com/sckott/httpcode") + (synopsis "HTTP status code helper") + (description "@code{httpcode} provides functionality for finding and +explaining the meaning of @code{HTTP} status codes. Functions are included for +searching for codes by full or partial number, by message, and to get +appropriate dog and cat images for many status codes.") + (license license:expat))) -- cgit 1.4.1 From 069554dc240078febab777c525a346594d02512e Mon Sep 17 00:00:00 2001 From: Wiktor Żelazny Date: Thu, 3 Oct 2019 15:49:13 +0200 Subject: gnu: Add r-latex2exp. * gnu/packages/cran.scm (r-latex2exp): new variable. Signed-off-by: Marius Bakke --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1e55606ef9..f56c3882c3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -20863,3 +20863,24 @@ explaining the meaning of @code{HTTP} status codes. Functions are included for searching for codes by full or partial number, by message, and to get appropriate dog and cat images for many status codes.") (license license:expat))) + +(define-public r-latex2exp + (package + (name "r-latex2exp") + (version "0.4.0") + (source (origin + (method url-fetch) + (uri (cran-uri "latex2exp" version)) + (sha256 + (base32 + "12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw")))) + (build-system r-build-system) + (propagated-inputs + `(("r-stringr" ,r-stringr) + ("r-magrittr", r-magrittr))) + (home-page "https://github.com/stefano-meschiari/latex2exp/") + (synopsis "Use LaTeX expressions in plots") + (description "@code{latex2exp} parses and converts LaTeX math formulas to +R's plotmath expressions, used to enter mathematical formulas and symbols to be +rendered as text, axis labels, etc. throughout R's plotting system.") + (license license:expat))) -- cgit 1.4.1 From 3ac12ca61bbe887f2ebc8cfbf9b09a179f30a849 Mon Sep 17 00:00:00 2001 From: Wiktor Żelazny Date: Thu, 3 Oct 2019 15:51:30 +0200 Subject: gnu: Add r-oai. * gnu/packages/cran.scm (r-oai): new variable. Signed-off-by: Marius Bakke --- gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) (limited to 'gnu/packages/cran.scm') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f56c3882c3..4c2ea9f130 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -20884,3 +20884,29 @@ appropriate dog and cat images for many status codes.") R's plotmath expressions, used to enter mathematical formulas and symbols to be rendered as text, axis labels, etc. throughout R's plotting system.") (license license:expat))) + +(define-public r-oai + (package + (name "r-oai") + (version "0.3.0") + (source (origin + (method url-fetch) + (uri (cran-uri "oai" version)) + (sha256 + (base32 + "1ipw9bq3ra66d1ddj1rylyyd20mlcb2i7phzhywra53s1fdifq1g")))) + (build-system r-build-system) + (propagated-inputs + `(("r-xml2" ,r-xml2) + ("r-httr" ,r-httr) + ("r-plyr" ,r-plyr) + ("r-stringr" ,r-stringr) + ("r-tibble" ,r-tibble))) + (home-page "https://github.com/ropensci/oai/") + (synopsis "General purpose OAI-PMH services client") + (description "@code{oai} provides a general purpose client to work with +any @dfn{Open Archives Initiative Protocol for 'Metadata' Harvesting} (OAI-PMH) +service. Functions are provided to work with the OAI-PMH verbs: +@code{GetRecord}, @code{Identify}, @code{ListIdentifiers}, +@code{ListMetadataFormats}, @code{ListRecords}, and @code{ListSets}.") + (license license:expat))) -- cgit 1.4.1