From 71a7dcb268f4b4924f1a9316e4f9bb1958e54220 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 28 Aug 2023 17:24:31 +0200 Subject: gnu: Add r-sangerseqr. * gnu/packages/bioconductor.scm (r-sangerseqr): New variable. --- gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) (limited to 'gnu/packages') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 4460b67fb8..a7f4c464b0 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -12777,6 +12777,28 @@ required source code files from the official Leidenalg distribution and several functions from the R igraph package.") (license license:gpl3+)))) +(define-public r-sangerseqr + (package + (name "r-sangerseqr") + (version "1.36.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "sangerseqR" version)) + (sha256 + (base32 + "0hhq5zsx4srd9ndr370m44f80qdlrqafjv1838wf65gzijffhfqb")))) + (properties `((upstream-name . "sangerseqR"))) + (build-system r-build-system) + (propagated-inputs (list r-biostrings r-shiny r-stringr)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/sangerseqR") + (synopsis "Tools for Sanger Sequencing data in R") + (description + "This package contains several tools for analyzing Sanger Sequencing data +files in R, including reading @file{.scf} and @file{.ab1} files, making +basecalls and plotting chromatograms.") + (license license:gpl2))) + (define-public r-sanssouci ;; sansscouci doesn't have a (versioned) release yet. ;; This is the latest commit as of packaging for Guix. -- cgit 1.4.1