From 90d8ac279fcffe12969e0bdd43a07363c212942e Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Thu, 24 Nov 2022 17:28:28 +0100
Subject: gnu: Add r-treesummarizedexperiment.

* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): New variable.
---
 gnu/packages/bioconductor.scm | 33 +++++++++++++++++++++++++++++++++
 1 file changed, 33 insertions(+)

(limited to 'gnu/packages')

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d9303b5873..17d5195ce5 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8989,6 +8989,39 @@ heterogeneous associated data to a single tree file and can be served as a
 platform for merging tree with associated data and converting file formats.")
     (license license:artistic2.0)))
 
+(define-public r-treesummarizedexperiment
+  (package
+    (name "r-treesummarizedexperiment")
+    (version "2.6.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "TreeSummarizedExperiment" version))
+              (sha256
+               (base32
+                "136zgpn1l059i64gj6iappr6nz42z4wbxlg3zpc5npwkqrz3val2"))))
+    (properties `((upstream-name . "TreeSummarizedExperiment")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-ape
+           r-biocgenerics
+           r-biocparallel
+           r-biostrings
+           r-dplyr
+           r-iranges
+           r-rlang
+           r-s4vectors
+           r-singlecellexperiment
+           r-summarizedexperiment
+           r-treeio))
+    (native-inputs (list r-knitr))
+    (home-page "https://bioconductor.org/packages/TreeSummarizedExperiment")
+    (synopsis "S4 class for data with tree structures")
+    (description
+     "@code{TreeSummarizedExperiment} extends @code{SingleCellExperiment} to
+include hierarchical information on the rows or columns of the rectangular
+data.")
+    (license license:gpl2+)))
+
 (define-public r-ggtree
   (package
     (name "r-ggtree")
-- 
cgit 1.4.1