From c36ce4763550deb521009ed3c5e83911e4e85005 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Sat, 21 Apr 2018 22:25:50 +0200
Subject: gnu: r-seurat: Update to 2.3.0.

* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.0.
[propagated-inputs]: Add r-cluster, r-dosnow, r-fitdistrplus, r-foreach,
r-lmtest, r-png, and r-rann.
---
 gnu/packages/bioinformatics.scm | 11 +++++++++--
 1 file changed, 9 insertions(+), 2 deletions(-)

(limited to 'gnu/packages')

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a000d9d1fc..a060139755 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9638,13 +9638,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
 (define-public r-seurat
   (package
     (name "r-seurat")
-    (version "2.2.1")
+    (version "2.3.0")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "Seurat" version))
               (sha256
                (base32
-                "1sr82nf38hq07avrfn8vlrzjq7dfm4pcr8l1nh6mnglcql2bk9z2"))
+                "0kp3lw1s896zkjd6x2wp8qcg7wnm5b40g8vihps13f1m7j4nx7r0"))
               ;; Delete pre-built jar.
               (snippet
                '(begin (delete-file "inst/java/ModularityOptimizer.jar")
@@ -9674,11 +9674,15 @@ Main-Class: ModularityOptimizer\n")))
     (propagated-inputs
      `(("r-ape" ,r-ape)
        ("r-caret" ,r-caret)
+       ("r-cluster" ,r-cluster)
        ("r-cowplot" ,r-cowplot)
        ("r-diffusionmap" ,r-diffusionmap)
+       ("r-dosnow" ,r-dosnow)
        ("r-dplyr" ,r-dplyr)
        ("r-dtw" ,r-dtw)
+       ("r-fitdistrplus" ,r-fitdistrplus)
        ("r-fnn" ,r-fnn)
+       ("r-foreach" ,r-foreach)
        ("r-fpc" ,r-fpc)
        ("r-gdata" ,r-gdata)
        ("r-ggplot2" ,r-ggplot2)
@@ -9690,13 +9694,16 @@ Main-Class: ModularityOptimizer\n")))
        ("r-igraph" ,r-igraph)
        ("r-irlba" ,r-irlba)
        ("r-lars" ,r-lars)
+       ("r-lmtest" ,r-lmtest)
        ("r-mass" ,r-mass)
        ("r-matrix" ,r-matrix)
        ("r-metap" ,r-metap)
        ("r-mixtools" ,r-mixtools)
        ("r-pbapply" ,r-pbapply)
        ("r-plotly" ,r-plotly)
+       ("r-png" ,r-png)
        ("r-ranger" ,r-ranger)
+       ("r-rann" ,r-rann)
        ("r-rcolorbrewer" ,r-rcolorbrewer)
        ("r-rcpp" ,r-rcpp)
        ("r-rcppeigen" ,r-rcppeigen)
-- 
cgit 1.4.1