From 9101c7bf8eb63762b2231a31a87d830c0a6b8e52 Mon Sep 17 00:00:00 2001 From: Felix Gruber Date: Sun, 10 Oct 2021 15:04:34 +0000 Subject: gnu: clipper: Disable non-deterministic test. MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit This test fails/succeeds non-deterministically. * gnu/packages/bioinformatics.scm (clipper)[arguments]: Disable non-deterministic test test_get_FDR_cutoff_mean. Signed-off-by: Ludovic Courtès --- gnu/packages/bioinformatics.scm | 9 ++++++++- 1 file changed, 8 insertions(+), 1 deletion(-) (limited to 'gnu') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 082e47bf5b..7dec74f0c0 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -22,6 +22,7 @@ ;;; Copyright © 2021 Tim Howes ;;; Copyright © 2021 Hong Li ;;; Copyright © 2021 Simon Tournier +;;; Copyright © 2021 Felix Gruber ;;; ;;; This file is part of GNU Guix. ;;; @@ -2363,7 +2364,13 @@ databases.") (let ((out (assoc-ref outputs "out"))) (for-each make-file-writable (find-files out "\\.gz$")) - #t)))))) + #t))) + (add-after 'unpack 'disable-nondeterministic-test + (lambda _ + ;; This test fails/succeeds non-deterministically. + (substitute* "clipper/test/test_call_peak.py" + (("test_get_FDR_cutoff_mean") "_test_get_FDR_cutoff_mean")) + #t))))) (inputs `(("htseq" ,htseq) ("python-pybedtools" ,python-pybedtools) -- cgit 1.4.1