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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2023-05-04 17:46:40 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-05-08 10:34:06 +0200 |
| commit | 0e09e8ab1554a7dffd60101cb4e631b348e43c9c (patch) | |
| tree | 7f66f5f348010803603907df039c5c6c5789f68b | |
| parent | b7e77446261fdc8dab360d7835a5dec919f6a79f (diff) | |
| download | guix-0e09e8ab1554a7dffd60101cb4e631b348e43c9c.tar.gz | |
gnu: Add r-multibac.
* gnu/packages/bioconductor.scm (r-multibac): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 768b55b25e..72bf40cc41 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -10101,6 +10101,36 @@ processing to visualization and annotation.") large datasets, including support for on-disk data representation.") (license license:expat))) +(define-public r-multibac + (package + (name "r-multibac") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MultiBaC" version)) + (sha256 + (base32 "1qwf1mvw81hb929xpnx5x910f7qnax9lkylhwzcdw1814s4zj25i")))) + (properties `((upstream-name . "MultiBaC"))) + (build-system r-build-system) + (propagated-inputs + (list r-ggplot2 + r-matrix + r-multiassayexperiment + r-pcamethods + r-plotrix + r-ropls)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/MultiBaC") + (synopsis "Multiomic batch effect correction") + (description + "MultiBaC is a strategy to correct batch effects from multiomic datasets +distributed across different labs or data acquisition events. MultiBaC is +able to remove batch effects across different omics generated within separate +batches provided that at least one common omic data type is included in all +the batches considered.") + (license license:gpl3))) + (define-public r-multtest (package (name "r-multtest") |