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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-09-21 10:55:14 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-09-21 11:09:46 +0200 |
| commit | d871080a415264916d739c7a17a60be5f044d204 (patch) | |
| tree | cedfaab292a632f1b2aaf0c6ab73d498e655895b | |
| parent | a7f6392caa3a025f522699b72822ed3e9e70ec23 (diff) | |
| download | guix-d871080a415264916d739c7a17a60be5f044d204.tar.gz | |
gnu: Add r-chromunity.
* gnu/packages/bioinformatics.scm (r-chromunity): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b573c8eb4d..58666cd666 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7456,6 +7456,45 @@ manipulation, debugging, visualization, lsf management, and common mskilab tasks.") (license license:expat)))) +(define-public r-chromunity + (let ((commit "09fce8bc12cb84b45a6ea25bf8db6e5b75113d4f") + (revision "1")) + (package + (name "r-chromunity") + (version (git-version "0.0.1" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/mskilab/chromunity") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0lp0h614k8fq6h9gpbylk4chh7q6w4qda8lx03ajrpppxmg7al2d")))) + (properties `((upstream-name . "chromunity"))) + (build-system r-build-system) + (propagated-inputs + (list r-arrow + r-biocgenerics + r-data-table + r-gchain + r-genomicranges + r-gutils + r-igraph + r-magrittr + r-mass + r-matrix + r-pbmcapply + r-plyr + r-r6 + r-skitools + r-zoo)) + (home-page "https://github.com/mskilab/chromunity") + (synopsis "Discovery of communities in Pore-C concatemers") + (description "This is a package for the discovery of communities in +Pore-C concatemers.") + (license license:gpl3)))) + (define-public r-presto (let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad") (revision "0")) |