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authorMarius Bakke <marius@gnu.org>2022-09-07 18:20:23 +0200
committerMarius Bakke <marius@gnu.org>2022-09-07 18:20:23 +0200
commit6cfb2e6270b2759fb98a0de665235bcbb9b9eccf (patch)
tree83c467772a94cbf72f96b26b08f0a29d1822b1c1 /gnu/packages/bioconductor.scm
parent92fdda5a6351dd5246b65165547d50d0b827cef3 (diff)
parent453e7dd8c4b9422a7c80e3b3e75589b6471f5af1 (diff)
downloadguix-6cfb2e6270b2759fb98a0de665235bcbb9b9eccf.tar.gz
Merge branch 'master' into staging
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm10
1 files changed, 5 insertions, 5 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b137232966..791c8b5476 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4113,17 +4113,17 @@ global-scaling and full-quantile normalization.")
 (define-public r-edger
   (package
     (name "r-edger")
-    (version "3.38.1")
+    (version "3.38.4")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "edgeR" version))
               (sha256
                (base32
-                "1q933m76155gy30wgps2gdd8pxzsfhppydjqn0fhjrwj6kqz8mik"))))
+                "1ww69xrg9qrmq7dix2k48j6akgn58ss3340hm7pjvzx508x1j6n6"))))
     (properties `((upstream-name . "edgeR")))
     (build-system r-build-system)
     (propagated-inputs
-     (list r-limma r-locfit r-rcpp r-statmod)) ;for estimateDisp
+     (list r-limma r-locfit r-rcpp))
     (home-page "http://bioinf.wehi.edu.au/edgeR")
     (synopsis "EdgeR does empirical analysis of digital gene expression data")
     (description "This package can do differential expression analysis of
@@ -4355,13 +4355,13 @@ names in their natural, rather than lexicographic, order.")
 (define-public r-genomicalignments
   (package
     (name "r-genomicalignments")
-    (version "1.32.0")
+    (version "1.32.1")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "GenomicAlignments" version))
               (sha256
                (base32
-                "1ifmlc0488f5yzcf4p92dmdc7psxl5c0aa7qpxjk0a07gf7lldbi"))))
+                "09pg7822camyav5zvlpv360sj5gz8q1bhk528qa2da2qsz74a3cz"))))
     (properties
      `((upstream-name . "GenomicAlignments")))
     (build-system r-build-system)