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author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-13 16:47:10 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-13 22:41:37 +0100 |
commit | 3e33377767b9b2cd3a37724cae364c317698317d (patch) | |
tree | 30b530a9a70f3b9df9020768f9d1babfd4c3e596 /gnu/packages/cran.scm | |
parent | ae07172c659796f07d9ad878c33be6a7c79ec6ee (diff) | |
download | guix-3e33377767b9b2cd3a37724cae364c317698317d.tar.gz |
gnu: Add r-abemus.
* gnu/packages/cran.scm (r-abemus): New variable.
Diffstat (limited to 'gnu/packages/cran.scm')
-rw-r--r-- | gnu/packages/cran.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 6432af9392..21a51a6d9f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16350,3 +16350,28 @@ cost-sensitive binary classification. The bias-correction is an estimate of the bias term added to regularized discriminant analysis that minimizes the overall risk.") (license license:gpl3))) + +(define-public r-abemus + (package + (name "r-abemus") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abemus" version)) + (sha256 + (base32 + "1dhllb184byp1yl15rg2w02zgw3iajag7cxshirg47mnmm7n70bb")))) + (properties `((upstream-name . "abemus"))) + (build-system r-build-system) + (propagated-inputs + `(("r-data-table" ,r-data-table))) + (home-page "https://cran.r-project.org/web/packages/abemus/") + (synopsis "Adaptive base error model in ultra-deep sequencing data") + (description + "This package provides an implementation of @dfn{Adaptive Base Error +Model in Ultra-deep Sequencing data} (ABEMUS), which combines +platform-specific genetic knowledge and empirical signal to readily detect and +quantify somatic @dfn{single nucleotide variants} (SNVs) in @dfn{circulating +cell free DNA} (cfDNA).") + (license license:gpl3))) |