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authorRicardo Wurmus <rekado@elephly.net>2018-06-02 12:04:03 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-06-02 13:39:10 +0200
commit39cc4917907c5f0376c30989970b857de49b8e77 (patch)
tree7400d9166c46860332274f6f5bdd594f20a0afaa /gnu/packages
parenta02b82088fe0cf949cea15de011c157d9e916022 (diff)
downloadguix-39cc4917907c5f0376c30989970b857de49b8e77.tar.gz
gnu: r-mzr: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.14.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 5 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 955decdead..1ac5b7caa1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9395,14 +9395,14 @@ proteomics packages.")
 (define-public r-mzr
   (package
     (name "r-mzr")
-    (version "2.12.0")
+    (version "2.14.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "mzR" version))
        (sha256
         (base32
-         "1x3gp30sfxz2v3k3swih9kff9b2rvk7hzhnlkp6ywlnn2wgb0q8c"))
+         "190m2bq5bqxhljaj4f7vz9wj5h5laaxd8zp5jampnql6xc4zmarg"))
        (modules '((guix build utils)))
        (snippet
         '(begin
@@ -9424,12 +9424,14 @@ proteomics packages.")
              #t)))))
     (inputs
      `(("boost" ,boost) ; use this instead of the bundled boost sources
-       ("netcdf" ,netcdf)))
+       ("netcdf" ,netcdf)
+       ("zlib" ,zlib)))
     (propagated-inputs
      `(("r-biobase" ,r-biobase)
        ("r-biocgenerics" ,r-biocgenerics)
        ("r-protgenerics" ,r-protgenerics)
        ("r-rcpp" ,r-rcpp)
+       ("r-rhdf5lib" ,r-rhdf5lib)
        ("r-zlibbioc" ,r-zlibbioc)))
     (home-page "https://github.com/sneumann/mzR/")
     (synopsis "Parser for mass spectrometry data files")