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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 15:57:30 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:47 +0100
commitb03c955c6f009e764b05018b399afe1eca8c1a7a (patch)
treea81f34709c0598430fa1bded083348c4101c0ab5 /gnu
parentd4b5d18684aaa4e462a6036a7622cf74b3250bed (diff)
downloadguix-b03c955c6f009e764b05018b399afe1eca8c1a7a.tar.gz
gnu: r-scran: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.0.
[propagated-inputs]: Add r-bluster, r-scuttle.  Remove r-iranges.

Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm8
1 files changed, 4 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5b10bfda18..c172f15ec4 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8911,14 +8911,14 @@ quality control.")
 (define-public r-scran
   (package
     (name "r-scran")
-    (version "1.16.0")
+    (version "1.18.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "scran" version))
        (sha256
         (base32
-         "1gm4ys4aq8h1pn45k1rxk384wjyf55izivw8kgxbrflj6j4xvvsv"))))
+         "1zap12rm61z2hg6ykknbif478nr7g468v8mp50bj5hqgi69ywcww"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-beachmat" ,r-beachmat)
@@ -8927,17 +8927,17 @@ quality control.")
        ("r-biocneighbors" ,r-biocneighbors)
        ("r-biocparallel" ,r-biocparallel)
        ("r-biocsingular" ,r-biocsingular)
+       ("r-bluster" ,r-bluster)
        ("r-delayedarray" ,r-delayedarray)
        ("r-delayedmatrixstats" ,r-delayedmatrixstats)
        ("r-dqrng" ,r-dqrng)
        ("r-edger" ,r-edger)
        ("r-igraph" ,r-igraph)
-       ("r-iranges" ,r-iranges)
        ("r-limma" ,r-limma)
        ("r-matrix" ,r-matrix)
        ("r-rcpp" ,r-rcpp)
        ("r-s4vectors" ,r-s4vectors)
-       ("r-scater" ,r-scater)
+       ("r-scuttle" ,r-scuttle)
        ("r-singlecellexperiment" ,r-singlecellexperiment)
        ("r-statmod" ,r-statmod)
        ("r-summarizedexperiment" ,r-summarizedexperiment)))