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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-03-15 14:26:27 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-03-15 17:40:38 +0100 |
| commit | db17611dc96319262e5712dd2b6818c05e1f2654 (patch) | |
| tree | b8100b9fb9351b1593b4db54006865a653807629 /gnu | |
| parent | cacd7b6768e1d4b72b9a7e3d71b7ac22203ca0f0 (diff) | |
| download | guix-db17611dc96319262e5712dd2b6818c05e1f2654.tar.gz | |
gnu: r-mast: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.24.1. [source]: Delete minified JavaScript. [arguments]: Add build phase 'process-javascript. [native-inputs]: Add esbuild and js-jquery-sticky-kit.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 24 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 5ed8eda3b9..7d09a11cb2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -10848,16 +10848,28 @@ the numbers of cells across batches.") (define-public r-mast (package (name "r-mast") - (version "1.24.0") + (version "1.24.1") (source (origin (method url-fetch) (uri (bioconductor-uri "MAST" version)) (sha256 (base32 - "133ijkw5sd0gl38dfr7qfqvvp2df7lg6j8vkvy54zlpamkg6l2x1")))) + "1c0lc4abnb859x481ky6d3kc9zzxwvf4kqgwxyqapc4g72b4vh65")) + (snippet + '(delete-file "docs/jquery.sticky-kit.min.js")))) (properties `((upstream-name . "MAST"))) (build-system r-build-system) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'process-javascript + (lambda* (#:key inputs #:allow-other-keys) + (invoke "esbuild" + (assoc-ref inputs "js-jquery-sticky-kit") + "--minify" + "--outfile=docs/jquery.sticky-kit.min.js")))))) (propagated-inputs (list r-abind r-biobase @@ -10872,7 +10884,16 @@ the numbers of cells across batches.") r-stringr r-summarizedexperiment)) (native-inputs - (list r-knitr)) + `(("esbuild" ,esbuild) + ("js-jquery-sticky-kit" + ,(origin + (method url-fetch) + (uri + "https://cdn.jsdelivr.net/gh/leafo/sticky-kit@v1.1.2/jquery.sticky-kit.js") + (sha256 + (base32 + "17c3a1hqc3ybwj7hpw8prazajp2x98aq7nyfn71h6lzjvblq297g")))) + ("r-knitr" ,r-knitr))) (home-page "https://github.com/RGLab/MAST/") (synopsis "Model-based analysis of single cell transcriptomics") (description |