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authorRicardo Wurmus <rekado@elephly.net>2019-04-27 20:44:43 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-04-27 20:45:21 +0200
commitfc3ebc3023f2c419ad07536de9211109c1bb2452 (patch)
tree20c96eca7deeb7760c4a677bc1a822e003b0f5cc /gnu
parentd22d790409d3a3b22f2a5660176e6407147ad597 (diff)
downloadguix-fc3ebc3023f2c419ad07536de9211109c1bb2452.tar.gz
gnu: r-ggbio: Fix build.
* gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to
patch out typo.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm10
1 files changed, 10 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4891bb15af..78d6fe8718 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9953,6 +9953,16 @@ effort and encourages consistency.")
         (base32
          "0wq49qqzkcn8s19xgaxf2s1j1a563d7pbhhvris6fhxfdjsz4934"))))
     (build-system r-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         ;; See https://github.com/tengfei/ggbio/issues/117
+         ;; This fix will be included in the next release.
+         (add-after 'unpack 'fix-typo
+           (lambda _
+             (substitute* "R/GGbio-class.R"
+               (("fechable") "fetchable"))
+             #t)))))
     (propagated-inputs
      `(("r-annotationdbi" ,r-annotationdbi)
        ("r-annotationfilter" ,r-annotationfilter)