diff options
| -rw-r--r-- | gnu/local.mk | 2 | ||||
| -rw-r--r-- | gnu/packages/patches/python-pyreadstat-link-libiconv.patch | 15 | ||||
| -rw-r--r-- | gnu/packages/statistics.scm | 45 |
3 files changed, 62 insertions, 0 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index 16a34065c6..5b59aba3af 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -62,6 +62,7 @@ # Copyright © 2023 B. Wilson <elaexuotee@wilsonb.com> # Copyright © 2023 gemmaro <gemmaro.dev@gmail.com> # Copyright © 2023 Herman Rimm <herman@rimm.ee> +# Copyright © 2023 Troy Figiel <troy@troyfigiel.com> # # This file is part of GNU Guix. # @@ -1777,6 +1778,7 @@ dist_patch_DATA = \ %D%/packages/patches/python-louvain-fix-test.patch \ %D%/packages/patches/python-random2-getrandbits-test.patch \ %D%/packages/patches/python-poppler-qt5-fix-build.patch \ + %D%/packages/patches/python-pyreadstat-link-libiconv.patch \ %D%/packages/patches/python-pypdf-annotate-tests-appropriately.patch \ %D%/packages/patches/python-pytorch2-system-libraries.patch \ %D%/packages/patches/python-sip-include-dirs.patch \ diff --git a/gnu/packages/patches/python-pyreadstat-link-libiconv.patch b/gnu/packages/patches/python-pyreadstat-link-libiconv.patch new file mode 100644 index 0000000000..7efd71faeb --- /dev/null +++ b/gnu/packages/patches/python-pyreadstat-link-libiconv.patch @@ -0,0 +1,15 @@ +To ensure libiconv can be found by Guix, we need to link the library. + +--- a/setup.py ++++ b/setup.py +@@ -81,8 +81,7 @@ else: + libraries.extend(["m", "z"]) + _platform = sys.platform + # Mac: iconv needs to be linked statically +- if _platform.lower().startswith("darwin"): +- libraries.append("iconv") ++ libraries.append("iconv") + + # Extensions + sources.sort() + diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 712b1a9c37..906ec456b6 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -18,6 +18,7 @@ ;;; Copyright © 2021 Frank Pursel <frank.pursel@gmail.com> ;;; Copyright © 2022 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2023 gemmaro <gemmaro.dev@gmail.com> +;;; Copyright © 2023 Troy Figiel <troy@troyfigiel.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -6919,6 +6920,50 @@ files, including Rmarkdown files.") popular stats packages like SAS, Stata and SPSS.") (license license:expat))) +(define-public python-pyreadstat + (package + (name "python-pyreadstat") + (version "1.2.4") + ;; No tests in the PyPI tarball. + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Roche/pyreadstat") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0zysrzixvqw2lwwykxqg5yj8a0zyv5s2bmk22x30f4rj2hgvq1pv")) + (patches (search-patches "python-pyreadstat-link-libiconv.patch")))) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'check 'change-home-dir + (lambda _ + ;; test_sav_expand and test_sav_write_basic_expanduser need a + ;; home directory with write permissions. + (setenv "HOME" "/tmp"))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + ;; The source also contains tests/test_version.py + ;; which checks the version in __init__.py against the + ;; one in setup.py. Since this requires texlive + ;; dependencies to run and is also not mentioned in + ;; how_to_test.md, this test is skipped. + (invoke "python" "tests/test_basic.py"))))))) + (build-system python-build-system) + (propagated-inputs (list python-pandas)) + (inputs (list libiconv zlib)) + (native-inputs (list python-cython-3)) + (home-page "https://github.com/Roche/pyreadstat") + (synopsis + "Read and write SAS, SPSS and Stata files into/from Pandas DataFrames") + (description + "This Python package can be used to read and write SAS, SPSS and Stata +files into/from Pandas DataFrames. It is a wrapper around the C library +@code{readstat}.") + (license license:asl2.0))) + (define-public r-quantpsyc (package (name "r-quantpsyc") |