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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 63a1c9923c..af2d7ce335 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3240,3 +3240,34 @@ motifs. It makes use of STAMP for comparing a set of motifs to a given database (e.g. JASPAR). It can also be used to visualize motifs, motif distributions, modules and filter motifs.") (license license:gpl2))) + +(define-public r-motifstack + (package + (name "r-motifstack") + (version "1.26.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "motifStack" version)) + (sha256 + (base32 + "1c4w39ilc4ca4wgi1b6iypadkbxvqjw7k2br0d7q03niw9qjkhxf")))) + (properties `((upstream-name . "motifStack"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ade4" ,r-ade4) + ("r-biostrings" ,r-biostrings) + ("r-grimport" ,r-grimport) + ("r-htmlwidgets" ,r-htmlwidgets) + ("r-motiv" ,r-motiv) + ("r-scales" ,r-scales) + ("r-xml" ,r-xml))) + (home-page "https://bioconductor.org/packages/motifStack/") + (synopsis "Plot stacked logos for DNA, RNA and amino acid sequences") + (description + "The motifStack package is designed for graphic representation of +multiple motifs with different similarity scores. It works with both DNA/RNA +sequence motifs and amino acid sequence motifs. In addition, it provides the +flexibility for users to customize the graphic parameters such as the font +type and symbol colors.") + (license license:gpl2+))) |