diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 22 |
1 files changed, 2 insertions, 20 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 955aa48f55..017f233cba 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2389,26 +2389,8 @@ simultaneously.") (srfi srfi-26)) ,@(package-arguments ngs-sdk)) ((#:phases phases) - `(alist-cons-after - 'enter-dir 'fix-java-symlink-installation - (lambda _ - ;; Only replace the version suffix, not the version number in - ;; the directory name. Reported here: - ;; https://github.com/ncbi/ngs/pull/4 - (substitute* "Makefile.java" - (((string-append "\\$\\(subst " - "(\\$\\(VERSION[^\\)]*\\))," - "(\\$\\([^\\)]+\\))," - "(\\$\\([^\\)]+\\)|\\$\\@)" - "\\)") - _ pattern replacement target) - (string-append "$(patsubst " - "%" pattern "," - "%" replacement "," - target ")")))) - (alist-replace - 'enter-dir (lambda _ (chdir "ngs-java") #t) - ,phases)))))) + `(modify-phases ,phases + (replace 'enter-dir (lambda _ (chdir "ngs-java") #t))))))) (inputs `(("jdk" ,icedtea6 "jdk") ("ngs-sdk" ,ngs-sdk))) |