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Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8f888052da..e62ce5feac 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22857,3 +22857,31 @@ and contains over 2000 functions for plotting spatial data, exploratory data analysis, model-fitting, simulation, spatial sampling, model diagnostics, and formal inference.") (license license:gpl2+))) + +(define-public r-gaston + (package + (name "r-gaston") + (version "1.5.6") + (source + (origin + (method url-fetch) + (uri (cran-uri "gaston" version)) + (sha256 + (base32 + "1bx6iqfjb9lf3vn0z7v8wjv9m7issvqsnymm4qsgl3622s6qz6rg")))) + (properties `((upstream-name . "gaston"))) + (build-system r-build-system) + (inputs `(("zlib" ,zlib))) + (propagated-inputs + `(("r-rcpp" ,r-rcpp) + ("r-rcppeigen" ,r-rcppeigen) + ("r-rcppparallel" ,r-rcppparallel))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://cran.r-project.org/web/packages/gaston/") + (synopsis "Genetic data handling (QC, GRM, LD, PCA) and linear mixed models") + (description + "This is a package for the manipulation of genetic data (SNPs). +Computation of @dfn{genetic relationship matrix} (GRM) and dominance matrix, +@dfn{linkage disequilibrium} (LD), and heritability with efficient algorithms +for linear mixed models (AIREML).") + (license license:gpl3))) |