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2018-06-14gnu: sssd: Update to 1.16.2.Tobias Geerinckx-Rice
* gnu/packages/sssd.scm (sssd): Update to 1.16.2. [native-inputs]: Add libxml2.
2018-06-13pull: Add '--list-generations'.Ludovic Courtès
* guix/scripts/pull.scm (show-help, %options): Add '--list-generations'. (display-profile-content, process-query): New procedures. (guix-pull): Honor '--list-generations'.
2018-06-13gnu: pigx-scrnaseq: Update to 0.0.5.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 0.0.5. [inputs]: Add python-magic.
2018-06-13gnu: emacs-orgalist: Update to 1.8.Nicolas Goaziou
* gnu/packages/emacs.scm (emacs-orgalist): Update to 1.8.
2018-06-13gnu: emacspeak: Update to 48.0.Kei Kebreau
* gnu/packages/emacs.scm (emacspeak): Update to 48.0. [arguments]: Use 'invoke'. In the 'install' phase, add additional installation directories and fix the launch script substitution. [inputs]: Add emacs and perl. [native-inputs]: Remove emacs-minimal.
2018-06-13nls: Update 'fr' translation.Julien Lepiller
2018-06-13gnu: r-factoextra: Fix syntax error.Ricardo Wurmus
* gnu/packages/cran.scm (r-factoextra)[description]: Fix syntax error.
2018-06-13gnu: r-seurat: Update to 2.3.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.2. [propagated-inputs]: Add r-hdf5r.
2018-06-13gnu: r-s4vectors: Update to 0.18.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.18.3.
2018-06-13gnu: r-biocviews: Update to 1.48.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.48.1.
2018-06-13gnu: r-rjson: Update to 0.2.20.Ricardo Wurmus
* gnu/packages/web.scm (r-rjson): Update to 0.2.20.
2018-06-13gnu: r-zoo: Update to 1.8-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-2.
2018-06-13gnu: r-rmarkdown: Update to 1.10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.10. [propagated-inputs]: Add r-tinytex.
2018-06-13gnu: r-highr: Update to 0.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-highr): Update to 0.7.
2018-06-13gnu: r-stringi: Update to 1.2.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.2.3.
2018-06-13gnu: r-munsell: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-munsell): Update to 0.5.0.
2018-06-13gnu: r-rgooglemaps: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/geo.scm (r-rgooglemaps): Update to 1.4.2.
2018-06-13gnu: r-reticulate: Update to 1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate): Update to 1.8.
2018-06-13gnu: r-later: Update to 0.7.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-later): Update to 0.7.3.
2018-06-13gnu: r-radiant-data: Update to 0.9.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.5. [propagated-inputs]: Remove r-plyr; add r-glue, r-plotly, r-readxl, r-rlang, and r-writexl.
2018-06-13gnu: r-cubature: Update to 1.3-13.Ricardo Wurmus
* gnu/packages/cran.scm (r-cubature): Update to 1.3-13.
2018-06-13gnu: r-extradistr: Update to 1.8.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-extradistr): Update to 1.8.9.
2018-06-13gnu: r-statnet-common: Update to 4.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-statnet-common): Update to 4.1.2. [propagated-inputs]: Add r-coda.
2018-06-13gnu: r-stringdist: Update to 0.9.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-stringdist): Update to 0.9.5.1.
2018-06-13gnu: r-rcpproll: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpproll): Update to 0.3.0.
2018-06-13gnu: r-extremes: Update to 2.0-9.Ricardo Wurmus
* gnu/packages/cran.scm (r-extremes): Update to 2.0-9.
2018-06-13gnu: r-sp: Update to 1.3-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-sp): Update to 1.3-1.
2018-06-13gnu: r-getoptlong: Update to 0.1.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-getoptlong): Update to 0.1.7.
2018-06-13gnu: r-circlize: Update to 0.4.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-circlize): Update to 0.4.4.
2018-06-13gnu: r-globaloptions: Update to 0.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-globaloptions): Update to 0.1.0.
2018-06-13gnu: Add r-writexl.Ricardo Wurmus
* gnu/packages/cran.scm (r-writexl): New variable.
2018-06-13gnu: Add r-hdf5r.Ricardo Wurmus
* gnu/packages/cran.scm (r-hdf5r): New variable.
2018-06-13gnu: Add r-nbclust.Ricardo Wurmus
* gnu/packages/cran.scm (r-nbclust): New variable.
2018-06-13gnu: Add r-factoextra.Ricardo Wurmus
* gnu/packages/cran.scm (r-factoextra): New variable.
2018-06-13gnu: Add r-factominer.Ricardo Wurmus
* gnu/packages/cran.scm (r-factominer): New variable.
2018-06-13gnu: Add r-flashclust.Ricardo Wurmus
* gnu/packages/cran.scm (r-flashclust): New variable.
2018-06-13gnu: Add r-ellipse.Ricardo Wurmus
* gnu/packages/cran.scm (r-ellipse): New variable.
2018-06-13gnu: Add r-ggpubr.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpubr): New variable.
2018-06-13gnu: Add r-ggsignif.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggsignif): New variable.
2018-06-13gnu: Add r-ggsci.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggsci): New variable.
2018-06-13gnu: openrct2: Update to 0.2.0.Rutger Helling
* gnu/packages/games.scm (openrct2-title-sequences): New variable. * gnu/packages/games.scm (openrct2-objects): New variable. * gnu/packages/games.scm (openrct2): Update to 0.2.0. [arguments]: Add phases 'fix-usr-share-path&add-data, 'fix-gcc7 and 'get-rid-of-errors. [inputs]: Add icu4c, openrct2-objects, openrct2-title-sequences. [native-inputs]: Add gcc@7.
2018-06-13tests: Honor the return value of 'start-service'.Clément Lassieur
Since commit dc7b3e56337ee9d8dcd8fe7d5cab71ef536d024f, 'start-service' returns the Shepherd's representation of the service as a sexp, and '#f' if the service fails to start. Also, it doesn't throw an exception when the service fails to start, so relying on an exception instead of relying on its return value is a false positive. * gnu/tests/base.scm (run-nss-mdns-test): Split tests so to check the return value of 'start-service'. (run-mcron-test, run-nss-mdns-test): Use 'test-assert' with the return value of 'start-service'. * gnu/tests/admin.scm (run-tailon-test): Idem. * gnu/tests/dict.scm (run-dicod-test): Idem. * gnu/tests/mail.scm (run-opensmtpd-test, run-exim-test, run-dovecot-test): Idem. * gnu/tests/messaging.scm (run-xmpp-test, run-bitlbee-test): Idem. * gnu/tests/nfs.scm (run-nfs-test): Idem. * gnu/tests/rsync.scm (run-rsync-test): Idem. * gnu/tests/ssh.scm (run-ssh-test): Idem. * gnu/tests/version-control.scm (run-cgit-test, run-git-http-test): Idem. * gnu/tests/web.scm (run-php-fpm-test): Idem.
2018-06-13gnu: vkquake: Update to 1.00.0.Rutger Helling
* gnu/packages/games.scm (vkquake): Update to 1.00.0.
2018-06-13gnu: cheese: Update to 3.28.0.Rutger Helling
* gnu/packages/gnome.scm (cheese): Update to 3.28.0.
2018-06-13gnu: openimageio: Update to 1.7.19.Leo Famulari
* gnu/packages/graphics.scm (openimageio): Update to 1.7.19.
2018-06-12gnu: tor: Update to 0.3.3.7.Tobias Geerinckx-Rice
* gnu/packages/tor.scm (tor): Update to 0.3.3.7.
2018-06-12gnu: Add qtwebglplugin.Hartmut Goebel
* gnu/packages/qt.scm (qtwebglplugin): New variable. Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
2018-06-12gnu: Add qtwebview.Hartmut Goebel
* gnu/packages/qt.scm (qtwebview): New variable.
2018-06-12services: nginx: Support extra content in the http block.Christopher Baines
This helpful when adding content to the nginx configuration file, which isn't supported by the record type used for the configuration. For example, like adding proxy_cache_path configuration. * gnu/packages/web.scm (<nginx-configuration>): Add new extra-content field. (nginx-configuration-extra-content): New field accessor. (default-nginx-config): Add support for the extra-content field. * doc/guix.texi (NGINX): Document the new extra-content field.
2018-06-12gnu: python-llfuse: Update to 1.3.3.Leo Famulari
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.3.3.
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