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2020-08-27gnu: vcflib: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Adjust custom 'install phase to add vcflib.pc.
2020-08-27gnu: vcflib: Use shared libraries.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib)[source]: Add patch. Add snippet to adjust files for new locations. [inputs]: Add fastahack, smithwaterman, tabixpp, xz. [native-inputs]: Add pkg-config. Remove the package-source of fastahack, fsom, smithwaterman, tabixpp. [arguments]: Remove make-flags. Add custom phase to add the output lib directory to the rpath. Adjust custom 'unpack-submodule-sources for the change in native-inputs. Adjust custom 'install phase to also install libraries and headers. * gnu/packages/patches/vcflib-use-shared-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2020-08-27gnu: fastahack: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Adjust custom 'install phase to add fastahack.pc.
2020-08-27gnu: fastahack: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Add phase to build PIE objects. Add custom phase to build dynamic library. Adjust custom 'install phase to install shared library and headers.
2020-08-27gnu: smithwaterman: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Adjust custom 'install phase to add smithwaterman.pc file.
2020-08-27gnu: smithwaterman: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Add custom phase to build PIE objects. Add custom 'build-dynamic phase to build dynamic library. Adjust custom 'install phase to install shared library and headers.
2020-08-27gnu: tabixpp: Install pkgconfig file.Efraim Flashner
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Adjust custom 'install phase to add tabixpp.pc file.
2020-08-27gnu: tabixpp: Build and install shared library and headers.Efraim Flashner
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Adjust custom 'build phase to build shared library. Adjust custom 'install phase to install libraries and header.
2020-08-27Revert "gnu: inetutils: Do not refer to canonical coreutils."Mathieu Othacehe
This reverts commit 61560d4bef05711db86320794437e1b261f4b5aa because it triggers too many rebuilds.
2020-08-27gnu: inetutils: Do not refer to canonical coreutils.Mathieu Othacehe
Make sure not to retain a reference to the canonical coreutils package. The Guix System closure size would otherwise be increased by including references to both canonical and non-canonical version of those packages. * gnu/packages/admin.scm (inetutils)[inputs]: Add "coreutils", [arguments]: and point to it with PATHDEF_CP variable.
2020-08-27gnu: isc-dhcp: Do not refer to canonical coreutils.Mathieu Othacehe
Make sure not to retain a reference to the canonical coreutils and sed packages. The Guix System closure size would otherwise be increased by including references to both canonical and non-canonical version of those packages. * gnu/packages/admin.scm (isc-dhcp)[inputs]: Add "coreutils" and "sed", [arguments]: and use them, instead of their canonical counterpart.
2020-08-27gnu: emacs-modus-vivendi-theme: Update to 0.12.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-modus-vivendi-theme): Update to 0.12.0.
2020-08-27gnu: emacs-modus-operandi-theme: Update to 0.12.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-modus-operandi-theme): Update to 0.12.0.
2020-08-27gnu: Add emacs-auth-source-xoauth2.Morgan Smith
* gnu/packages/emacs-xyz.scm (emacs-auth-source-xoauth2): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-08-27gnu: lrslib: Update to 7.1.Andreas Enge
* gnu/packages/maths.scm (lrslib): Update to 7.1.
2020-08-27gnu: Add komikku.Leo Prikler
* gnu/packages/gnome.scm (komikku): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: libhandy: Update to 0.90.0.Leo Prikler
* gnu/packages/gnome.scm (libhandy): Update to 0.90.0. [source]<url>: Use GNOME gitlab. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-cloudscraper.Leo Prikler
* gnu/packages/python-web.scm (python-cloudscraper): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-requests-toolbelt-0.9.1.Leo Prikler
* gnu/packages/python-web.scm (python-requests-toolbelt-0.9.1): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-dateparser.Leo Prikler
* gnu/packages/python-xyz.scm (python-dateparser): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-pyparsing-2.4.7.Leo Prikler
* gnu/packages/python-xyz.scm (python-pyparsing-2.4.7): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-pure-protobuf.Leo Prikler
* gnu/packages/protobuf.scm (python-pure-protobuf): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27linux-libre: Enable module compression for all versions.Mathieu Othacehe
This is a follow-up of 5fe12be0dd03d1a316343549f8c131d931f21a9a. It enables module compression for all supported Linux versions. * gnu/packages/aux-files/linux-libre/4.14-arm.conf: Enable GZIP module compression. * gnu/packages/aux-files/linux-libre/4.14-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.14-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.19-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.4-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.4-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.9-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/4.9-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.4-x86_64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-arm.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-arm64.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-i686.conf: Ditto. * gnu/packages/aux-files/linux-libre/5.7-x86_64.conf: Ditto.
2020-08-27gnu: kodi: Update to 18.8.Timotej Lazar
* gnu/packages/kodi.scm (kodi): Update to 18.8. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: gnome-mines: Update to 3.36.0.Michael Rohleder
* gnu/packages/gnome.scm (gnome-mines): Update to 3.36.0. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: libdazzle: Update to 3.37.1.Michael Rohleder
* gnu/packages/gnome.scm (libdazzle): Update to 3.37.1. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-stock-supply.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-stock-supply): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-purchase-request.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-purchase-request): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-purchase.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-purchase): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-invoice-stock.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-invoice-stock): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-invoice.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-invoice): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-account-product.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-account-product): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: Add python-trytond-analytic-account.Vinicius Monego
* gnu/packages/tryton.scm (python-trytond-analytic-account): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-08-27gnu: xorg-server: Update replacement to 1.20.9 [security-fixes].Mark H Weaver
Includes fixes for CVE-2020-1436, CVE-2020-14345, CVE-2020-14346, and CVE-2020-14361. * gnu/packages/xorg.scm (xorg-server/fixed): Update to 1.20.9. * gnu/packages/patches/xorg-server-CVE-2020-14347.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2020-08-26gnu: linux-libre@5.7: Update to 5.7.18.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.18. (linux-libre-5.7-pristine-source): Update hash. (deblob-scripts-5.7): Update to 5.7.18.
2020-08-26gnu: linux-libre@5.4: Update to 5.4.61.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.61. (linux-libre-5.4-pristine-source): Update hash. (deblob-scripts-5.4): Update to 5.4.61.
2020-08-26gnu: linux-libre@4.19: Update to 4.19.142.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.142. (linux-libre-4.19-pristine-source): Update hash. (deblob-scripts-4.19): Update to 4.19.142.
2020-08-26gnu: linux-libre@4.14: Update to 4.14.195.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.195. (linux-libre-4.14-pristine-source): Update hash. (deblob-scripts-4.14): Update to 4.14.195.
2020-08-26gnu: linux-libre@4.9: Update to 4.9.234.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.234. (linux-libre-4.9-pristine-source): Update hash. (deblob-scripts-4.9): Update to 4.9.234.
2020-08-26gnu: linux-libre@4.4: Update to 4.4.234.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.234. (linux-libre-4.4-pristine-source): Update hash. (deblob-scripts-4.4): Update to 4.4.234.
2020-08-26gnu: guix: Update to guix-1.1.0-23.2f458a.Jakub Kądziołka
* gnu/packages/package-management.scm (guix): Update to guix-1.1.0-23.2f458a.
2020-08-26gnu: guix: Rollback to 1.1.0-22.4b5a6f.Jakub Kądziołka
* gnu/packages/package-management.scm (guix): Rollback to 1.1.0-22.4b5a6f.
2020-08-26gnu: linux-libre: Update to 5.8.4.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.8-version): Update to 5.8.4. (linux-libre-5.8-pristine-source): Update hash. (deblob-scripts-5.8): Update to 5.8.4.
2020-08-26gnu: perl-text-csv-xs: Update to 1.44.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-text-csv-xs): Update to 1.44.
2020-08-26gnu: perl-time-hires: Tweak synopsis.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-time-hires)[synopsis]: Tweak.
2020-08-26gnu: perl-time-hires: Update to 1.9764.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-time-hires): Update to 1.9764.
2020-08-26gnu: flatpak: Update to 1.8.2.Tobias Geerinckx-Rice
* gnu/packages/package-management.scm (flatpak): Update to 1.8.2.
2020-08-26gnu: mate-system-monitor: Update to 1.24.1.Tobias Geerinckx-Rice
* gnu/packages/mate.scm (mate-system-monitor): Update to 1.24.1. [source]: Hard-code NAME.
2020-08-26gnu: mate-screensaver: Update to 1.24.1.Tobias Geerinckx-Rice
* gnu/packages/mate.scm (mate-screensaver): Update to 1.24.1. [source]: Hard-code NAME.
2020-08-26gnu: totem-pl-parser: Update to 3.26.5.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (totem-pl-parser): Update to 3.26.5.
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