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2019-01-09gnu: Add r-assertive-models.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-models): New variable.
2019-01-09gnu: Add r-assertive-matrices.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-matrices): New variable.
2019-01-09gnu: Add r-assertive-sets.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-sets): New variable.
2019-01-09gnu: Add r-assertive-numbers.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-numbers): New variable.
2019-01-09gnu: Add r-assertive-properties.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-properties): New variable.
2019-01-09gnu: Add r-assertive-base.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertive-base): New variable.
2019-01-09gnu: Add r-rmpfr.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpfr): New variable.
2019-01-09gnu: Add r-gmp.Ricardo Wurmus
* gnu/packages/cran.scm (r-gmp): New variable.
2019-01-09gnu: Add r-bigrquery.Ricardo Wurmus
* gnu/packages/cran.scm (r-bigrquery): New variable.
2019-01-09gnu: Add r-ontologyindex.Ricardo Wurmus
* gnu/packages/cran.scm (r-ontologyindex): New variable.
2019-01-09gnu: Add r-rapidjsonr.Ricardo Wurmus
* gnu/packages/cran.scm (r-rapidjsonr): New variable.
2019-01-09gnu: Add r-pixmap.Ricardo Wurmus
* gnu/packages/cran.scm (r-pixmap): New variable.
2019-01-09gnu: Add r-strucchange.Ricardo Wurmus
* gnu/packages/cran.scm (r-strucchange): New variable.
2019-01-09gnu: Add r-als.Ricardo Wurmus
* gnu/packages/cran.scm (r-als): New variable.
2019-01-09gnu: Add r-chemometricswithr.Ricardo Wurmus
* gnu/packages/cran.scm (r-chemometricswithr): New variable.
2019-01-09gnu: Add r-iso.Ricardo Wurmus
* gnu/packages/cran.scm (r-iso): New variable.
2019-01-09gnu: Add r-nnls.Ricardo Wurmus
* gnu/packages/cran.scm (r-nnls): New variable.
2019-01-09gnu: Add r-kohonen.Ricardo Wurmus
* gnu/packages/cran.scm (r-kohonen): New variable.
2019-01-09gnu: Add r-grimport.Ricardo Wurmus
* gnu/packages/cran.scm (r-grimport): New variable.
2019-01-09gnu: Add r-tractor-base.Ricardo Wurmus
* gnu/packages/cran.scm (r-tractor-base): New variable.
2019-01-09gnu: Add r-reportr.Ricardo Wurmus
* gnu/packages/cran.scm (r-reportr): New variable.
2019-01-09gnu: Add r-ore.Ricardo Wurmus
* gnu/packages/cran.scm (r-ore): New variable.
2019-01-09gnu: Add r-shades.Ricardo Wurmus
* gnu/packages/cran.scm (r-shades): New variable.
2019-01-09gnu: Add r-rnifti.Ricardo Wurmus
* gnu/packages/cran.scm (r-rnifti): New variable.
2019-01-09gnu: Add r-tfmpvalue.Ricardo Wurmus
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
2019-01-09gnu: Add r-splitstackshape.Ricardo Wurmus
* gnu/packages/cran.scm (r-splitstackshape): New variable.
2019-01-09gnu: Add r-lassopv.Ricardo Wurmus
* gnu/packages/cran.scm (r-lassopv): New variable.
2019-01-09gnu: Add r-flare.Ricardo Wurmus
* gnu/packages/cran.scm (r-flare): New variable.
2019-01-09gnu: Add r-vbsr.Ricardo Wurmus
* gnu/packages/cran.scm (r-vbsr): New variable.
2019-01-09gnu: Add r-rpostgresql.Ricardo Wurmus
* gnu/packages/cran.scm (r-rpostgresql): New variable.
2019-01-09gnu: Add r-rspectra.Ricardo Wurmus
* gnu/packages/cran.scm (r-rspectra): New variable.
2019-01-09build-system/asdf: 'package-with-build-system' accesses inputs lazily.Ludovic Courtès
Fixes a bug whereby we would, at the top-level (while evaluation lisp.scm package definitions), attempt to access package inputs. Because of circular dependencies, this could lead to unbound variables as reported by Arun Isaac <arunisaac@systemreboot.net> at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=33801#56>. * guix/build-system/asdf.scm (package-with-build-system)[transform] (new-propagated-inputs): Turn into a procedure. Adjust user accordingly.
2019-01-09self: Drop support for Guix < 0.15 on Guile 2.0.Ludovic Courtès
* guix/self.scm (false-if-wrong-guile, package-for-guile): Remove. (specification->package): Remove "guile2.0-" variants. (compiled-guix): #:guile-for-build defaults to (default-guile). Use 'specification->package' instead of 'package-for-guile'. (guile-for-build): Remove. (guix-derivation): Use 'default-guile' instead of 'guile-for-build'. Check whether we're running on Guile 2.0 with PULL-VERSION < 1.
2019-01-09Remove most uses of the _IO*F constants.Ludovic Courtès
These constants, for use with 'setvbuf', were deprecated in Guile 2.2 and disappeared in Guile 3.0. Here we keep these constants in build-side code where removing them is not feasible. * guix/build/download-nar.scm (download-nar): Adjust 'setvbuf' calls to the Guile 2.2+ API. * guix/build/download.scm (open-socket-for-uri): Likewise. (open-connection-for-uri, url-fetch): Likewise. * guix/build/make-bootstrap.scm (make-stripped-libc): Likewise. * guix/build/union.scm (setvbuf) [guile-2.0]: New conditional wrapper. (union-build): Adjust to new API. * guix/ftp-client.scm (ftp-open, ftp-list, ftp-retr): Likewise. * guix/http-client.scm (http-fetch): Likewise. * guix/inferior.scm (proxy): Likewise. * guix/scripts/substitute.scm (fetch, http-multiple-get): Likewise. * guix/self.scm (compiled-modules): Likewise. * guix/ssh.scm (remote-daemon-channel, store-import-channel) (store-export-channel): Likewise. * guix/ui.scm (initialize-guix): Likewise. * tests/publish.scm (http-get-port): Likewise. * guix/store.scm (%newlines): Adjust comment.
2019-01-09download: Remove Guile 2.0 workaround.Ludovic Courtès
* guix/build/download.scm: Remove Guile 2.0 workaround.
2019-01-09maint: Remove 'cond-expand' forms for Guile 2.0.Ludovic Courtès
Note: Leave 'cond-expand' forms used in the build-side modules that can run on %BOOTSTRAP-GUILE, which is currently Guile 2.0. * guix/build/compile.scm: Move 'use-modules' clause from 'cond-expand' to 'define-module' form. (%default-optimizations): Remove 'cond-expand'. * guix/build/download.scm (tls-wrap): Remove 'cond-expand'. * guix/build/syscalls.scm: Remove 'cond-expand' form around '%set-automatic-finalization-enabled?!' and 'without-automatic-finalization'. * guix/inferior.scm (port->inferior): Remove 'cond-expand'. * guix/scripts/pack.scm (wrapped-package)[build]: Remove 'cond-expand'. * guix/status.scm (build-event-output-port): Remove 'cond-expand'. * guix/store.scm (open-inet-socket): Remove 'cond-expand'. * guix/ui.scm (install-locale): Remove 'cond-expand'. * tests/status.scm ("current-build-output-port, UTF-8 + garbage"): Remove 'cond-expand'. * tests/store.scm ("current-build-output-port, UTF-8 + garbage"): Remove 'cond-expand'.
2019-01-09build: Require Guile 2.2.Ludovic Courtès
* configure.ac: Require Guile 2.2. * README: Adjust accordingly. * doc/guix.texi (Requirements): Likewise. * gnu/packages/package-management.scm (guile2.0-guix): Deprecate. (guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
2019-01-08doc: Recommend using the installer script.Ricardo Wurmus
* doc/guix.texi (Installation): Make it clear that the installer script is the recommended, easy way to install Guix.
2019-01-08pull: Document '--system'.Ludovic Courtès
Fixes <https://bugs.gnu.org/34010>. Reported by Alex Kost <alezost@gmail.com>. This is a followup to 5923102f7b58f0a0120926ec5b81ed48b26a188e. * guix/scripts/pull.scm (show-help): Add '--system'.
2019-01-08self: Compress Info files.Ludovic Courtès
Fixes <https://bugs.gnu.org/33993>. Reported by Adonay Felipe Nogueira <adfeno@hyperbola.info>. * guix/self.scm (info-manual): Compress Info files.
2019-01-08build-self: Spin only on TTYs.Ludovic Courtès
* build-aux/build-self.scm (build-program): Spin only when 'isatty?' returns true.
2019-01-08gnu: dvdisaster: Run regression tests.Eric Bavier
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Remove #:tests? argument. Add 'check' phase.
2019-01-08gnu: dvdisaster: Install desktop file.Eric Bavier
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add 'install-desktop phase.
2019-01-08gnu: prosody: Update to 0.11.1.Clément Lassieur
* gnu/packages/messaging.scm (prosody): Update to 0.11.1. [arguments]: Replace "Makefile" with "GNUmakefile". Change "5.1" to "5.2". Explain why there are no tests. [inputs]: Replace lua-5.1, lua5.1-bitop, lua5.1-expat, lua5.1-socket, lua5.1-filesystem, lua5.1-sec with lua-5.2, lua5.2-bitop, lua5.2-expat, lua5.2-socket, lua5.2-filesystem, lua5.2-sec.
2019-01-08gnu: Add lua5.2-sec.Clément Lassieur
* gnu/packages/lua.scm (lua5.2-sec): New variable. (make-lua-sec): New procedure. (lua5.1-sec, lua5.2-sec): Call it.
2019-01-08gnu: Add lua-filesystem and lua5.2-filesystem.Clément Lassieur
* gnu/packages/lua.scm (lua-filesystem, lua5.2-filesystem): New variables. (make-lua-filesystem): New procedure. (lua-filesystem, lua5.1-filesystem, lua5.2-filesystem): Call it.
2019-01-08gnu: Add lua5.2-socket.Clément Lassieur
* gnu/packages/lua.scm (lua5.2-socket): New variable. (make-lua-socket): New procedure. (lua5.1-socket, lua5.2-socket): Call it.
2019-01-08gnu: Add lua5.2-expat.Clément Lassieur
* gnu/packages/lua.scm (lua5.2-expat): New variable. (make-lua-expat): New procedure. (lua5.1-expat, lua5.2-expat): Call it.
2019-01-08gnu: criu: Update to 3.11.Efraim Flashner
* gnu/packages/virtualization.scm (criu): Update to 3.11. [arguments]: Add custom phase to patch python calls.
2019-01-08gnu: criu: Fix building on armhf-linux.Efraim Flashner
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm version in the Makefile.
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