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`texlive-updmap.cfg' builds "updmap.cfg" file for texlive packages in native
inputs, because those do not benefit from the profile hook doing the very same
thing. Consequently, `texlive-updmap.cfg' should not appear in propagated
inputs.
Moreover, XeTeX do not rely on "updmap.cfg" to find fonts; this is a second
reason to remove it from propagated inputs in this particular package.
* gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Remove
TEXLIVE-UPDMAP.CFG call. Add TEXLIVE-COLLECTION-BASIC. Remove TEXLIVE-IFTEX,
which is already included in TEXLIVE-COLLECTION-BASIC. Sort inputs
alphabetically.
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This fixes <https://issues.guix.gnu.org/64729>.
* gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Add
TEXLIVE-ENVIRON, TEXLIVE-PDFCOL, TEXLIVE-PGF, and TEXLIVE-XETEX.
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* gnu/packages/python-xyz.scm (python-sshtunnel)[native-inputs]:
Add python-mock.
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Fixes <https://issues.guix.gnu.org/64350>.
* gnu/packages/python-xyz.scm (python-wand)[arguments]<#:phases>: Pass tests?
to 'check.
Reported-by: Thorsten Wilms <t_w_@freenet.de>
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
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* gnu/packages/python-xyz.scm (python-numpy-documentation)[native-inputs]:
Use TEXLIVE-UPDMAP.CFG. Add TEXLIVE-LATEXMK and TEXLIVE-XETEX.
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* gnu/packages/python-xyz.scm (python-ipython-documentation)[native-inputs]:
Use TEXLIVE-UPDMAP.CFG. Add TEXLIVE-LATEXMK and TEXLIVE-XETEX.
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TEXLIVE-UPDMAP.CFG and TEXLIVE-TINY should only be used as native inputs.
Also remove texlive packages already provided by them.
* doc/build.scm (pdf-manual):
* gnu/packages/algebra.scm (pari-gp):
* gnu/packages/bioinformatics.scm (discrover):
(phyml):
(velvet):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/chez.scm (stex-bootstrap):
(chez-web):
(chez-sockets):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/emacs-xyz.scm (emacs-auctex):
* gnu/packages/engineering.scm (fastcap):
* gnu/packages/fsf.scm (book-faif):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/ocaml.scm (unison):
(ocaml-bibtex2html):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
(python-pypandoc):
* gnu/packages/radio.scm (gnuradio):
(libosmo-dsp):
* gnu/packages/statistics.scm (r-with-tests):
* gnu/packages/tex.scm (texlive-makecmds):
(texlive-innerscript):
(teximpatient):
(texlive-xkeyval): Remove texlive packages already provided by
TEXLIVE-UPDMAP.CFG. Don't add TEXLIVE-TINY or TEXLIVE-UPDMAP.CFG as inputs.
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* gnu/packages/tex.scm (texlive-jknappen): Deprecate variable.
(texlive-paralist):
(texlive-jadetex):
(texlive-xindy):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert): Use TEXLIVE-JKNAPLTX instead.
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* gnu/packages/tex.scm (texlive-rsfs): New variable.
(texlive-fonts-rsfs): Deprecate variable.
* gnu/packages/docbook.scm (dblatex)[inputs]:
* gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Use new
name.
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* gnu/packages/tex.scm (texlive-ucs): New variable.
(texlive-latex-ucs): Deprecate variable.
* gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Use new
name.
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* gnu/packages/tex.scm (texlive-type1cm): New variable.
(texlive-latex-type1cm): Deprecate variable.
*
gnu/packages/python-xyz.scm (python-matplotlib-documentation)[native-inputs]:
Use new name. Re-order alphabetically.
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* gnu/packages/tex.scm (texlive-parskip): New variable.
(texlive-latex-parskip): Deprecate variable.
* gnu/packages/maths.scm (hypre):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
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* gnu/packages/tex.scm (texlive-jknapltx): New variable.
(texlive-latex-jknapltx): Deprecate variable.
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/python-xyz.scm (python-nbconvert): Use new name.
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* gnu/packages/tex.scm (texlive-float): New variable.
(texlive-latex-float): Deprecate variable.
(texlive-showexpl):
(texlive-minted):
(texlive-apa6):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
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* gnu/packages/tex.scm (texlive-ec): New variable.
(texlive-fonts-ec): Deprecate variable.
(lyx):
(biber):
* gnu/packages/python-xyz.scm (python-pypandoc):
* gnu/packages/statistics.scm (r-with-tests):
* doc/build.scm (pdf-manual):
* gnu/packages/bioinformatics.scm (discrover):
(phyml):
(velvet):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/chez.scm (stex-bootstrap):
* gnu/packages/ocaml.scm (unison):
(ocaml-bibtex2html):
* gnu/packages/plotutils.scm (asymptote): Use new name.
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* gnu/packages/tex.scm (texlive-upquote): New variable.
(texlive-latex-upquote): Deprecate variable.
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx):
* gnu/packages/statistics.scm (r-with-tests): Use new name.
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* gnu/packages/tex.scm (texlive-geometry): New variable.
(texlive-latex-geometry): Deprecate variable.
(texlive-xindy):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
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* gnu/packages/tex.scm (texlive-expdlist): New variable.
(texlive-latex-expdlist): Deprecate variable.
* gnu/packages/python-xyz.scm (python-numpy-documentation):
(python-matplotlib-documentation): Apply renaming.
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* gnu/packages/tex.scm (texlive-trimspaces): New variable.
(texlive-latex-trimspaces):
(texlive-pstool):
* gnu/packages/python-xyz.scm (python-nbconvert):
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* gnu/packages/python-xyz.scm (python-dask): Update to 2023.7.0.
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* gnu/packages/python-xyz.scm (python-makefun): New variable.
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
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* gnu/packages/python-xyz.scm (python-mizani)[native-inputs]: Add
python-setuptools-scm to correct embedded version form 0.0.0 to 0.9.2.
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* gnu/packages/python-xyz.scm (python-redo): New variable.
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* gnu/packages/python-xyz.scm (python-cloup): New variable.
Co-authored-by: jgart <jgart@dismail.de>
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* gnu/packages/python-xyz.scm (bpython): Update to 0.24.
[propagated-inputs]: Remove python-six.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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Fixes the build of python-curtsies.
The python-six dependency was accidentally removed in commit
9e1cbc62e54513ce92f7fc282700c87c93bfd25c.
* gnu/packages/python-xyz.scm (python-blessed)[propagated-inputs]: Add
python-six.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/python-xyz.scm (python-pyzmq) [arguments]: Delete the
disable-problematic-tests phase and add a configure phase.
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* gnu/packages/python-xyz.scm (python-pikepdf): Update to 7.2.0.
[native-inputs]: Remove PYTHON-SETUPTOOLS, PYTHON-SETUPTOOLS-SCM,
PYTHON-SETUPTOOLS-SCM-GIT-ARCHIVE, PYTHON-TOML, PYTHON-WHEEL. Add
PYTHON-ATTRS, PYTHON-COVERAGE, PYTHON-HYPOTHESIS, PYTHON-PSUTIL,
PYTHON-PYTEST, PYTHON-PYTEST-COV, PYTHON-PYTEST-TIMEOUT, PYTHON-PYTEST-XDIST,
PYTHON-DATEUTIL, PYTHON-TOMLI.
[propagated-inputs]: Remove PYTHON-LXML. Add PYTHON-DEPRECATION,
PYTHON-PACKAGING, PYTHON-PILLOW.
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* gnu/packages/python-xyz.scm (python-cesium): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/python-xyz.scm (python-xopen): Update to 1.7.0.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Add pigz, python-isal, and python-typing-extensions; move
python-setuptools-scm from here...
[native-inputs]: ...to here; add python-pytest and python-pytest-timeout.
[description]: Reflow.
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* gnu/packages/python-xyz.scm (python-pyelftools): Update to 0.29.
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* gnu/packages/python-xyz.scm (python-aiofiles): Update to 23.1.0.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/python-xyz.scm (python-lazy-loader): New variable.
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* gnu/packages/python-xyz.scm (python-rasterio): New variable.
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* gnu/packages/python-xyz.scm (python-affine): New variable.
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* gnu/packages/python-xyz.scm (python-snuggs): New variable.
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* gnu/packages/python-xyz.scm (python-cftime): Update to 1.6.2.
[build-system]: Use pyproject-build-system.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/python-xyz.scm (python-fastprogress): New variable.
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* gnu/packages/python-xyz.scm (python-codespell): Update to 2.2.5.
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* gnu/packages/python-xyz.scm (python-dask)[propagated-inputs]: Add
python-import-metadata.
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* gnu/packages/python-xyz.scm (python-cython-next): Update to 3.0.0b2.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/python-xyz.scm (python-pyzmq) [arguments]: Reinstate the
test_auth and test_zmqstream tests, fixed in the last 25.1.0 version.
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* gnu/packages/python-xyz.scm (python-pdoc): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/python-xyz.scm (python-pyzmq): Update to 25.1.0.
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* gnu/packages/python-xyz.scm (python-pyzmq)
[arguments]: Precise comments regarding #:tests?. Override check phase.
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* gnu/packages/python-xyz.scm (python-scikit-build): Update to 0.17.6.
[arguments]: Re-instate test_cxx_compiler test in check phase.
[native-inputs]: Add python-virtualenv.
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* gnu/packages/python-xyz.scm (python-shapely): Update to 2.0.1.
[arguments]: Remove 'patch-geos-path build phase; add 'build-extensions phase.
[build-system]: Use pyproject-build-system.
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* gnu/packages/python-xyz.scm (python-blosc)[arguments]: Don't disable
tests. Add custom 'check phase.
[native-inputs]: Add cmake-minimal.
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* gnu/packages/python-xyz.scm (python-blosc): Update to 1.11.1.
[source]: Update snippet.
[arguments]: Adjust custom 'find-blosc phase.
[propagated-inputs]: Add python-scikit-build.
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* gnu/packages/python-xyz.scm (python-blosc)[source]: Add snippet to
remove bundled sources.
[arguments]: Add a custom phase to set location of blosc.
[inputs]: Add c-blosc.
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